Department of Neurobiology, University of Alabama at Birmingham,
Birmingham, Alabama (Y.C., D.S.W.); and Department of Molecular Biology
and Pharmacology, Washington University School of Medicine, St. Louis,
Missouri (D.F.C.)
 |
Introduction |
GABA-gated
ion channels in the mammalian central nervous system can be classified
into GABAA and GABAC
receptors according to their pharmacological properties (Woodward et
al., 1992
; Feigenspan et al., 1993
; Qian and Dowling, 1993
; Macdonald
and Olsen, 1994
; Johnston, 1996
; Lukasiewicz, 1996
).
GABAA receptors can be modulated by
benzodiazepines, barbiturates, and neurosteroids and can be blocked by
bicuculline, whereas GABAC receptors are
insensitive to all of these compounds. These two types of GABA
receptors are also distinct in their activation characteristics. For
example, GABAC receptors activate and deactivate
more slowly than GABAA receptors and show minimal
desensitization (Polenzani et al., 1991
; Feigenspan et al., 1993
; Qian
and Dowling, 1993
, 1994
, 1995
; Lukasiewicz et al., 1994
). These
differences between the two types of receptors arise from their
different subunit compositions. Recombinant 

receptors can
reconstitute most of the pharmacological and physiological properties
of GABAA receptors (Pritchett et al., 1989
; Sigel
et al., 1990
; Verdoorn et al., 1990
), whereas recombinant homomeric
1 GABA receptors have similar properties to native
GABAC receptors (Cutting et al., 1991
; Polenzani
et al., 1991
; Feigenspan et al., 1993
; Amin and Weiss, 1994
, 1996
).
The exogenously expressed
1 homomeric
GABAC receptor can be activated by several GABA
agonists including cis-4-aminocrotonic acid (CACA),
trans-4-aminocrotonic acid (TACA), muscimol,
imidazole-4-acetic acid (I4AA), and isoguvacine (Woodward et al., 1992
;
Kusama et al., 1993
). These agonists differ in their sensitivities
(EC50, or concentration of agonist required for
half-maximal activation) and efficacies (maximal current). It is
unclear whether these differences arise from distinct binding
affinities and/or distinct gating kinetics.
In this study, using the intact single oocyte binding technique
(Chang and Weiss, 1999
) in conjunction with the two-electrode voltage
clamp, we have determined the apparent binding affinities (Ki) as well as agonist sensitivities
(EC50) and potencies
(Imax) for TACA, GABA, muscimol, I4AA,
CACA, and isoguvacine on
1 homomeric GABAC
receptors. The results showed that the apparent affinities of these
agonists fell into two groups. The high affinity group was comprised of
agonists with longer distances between the nitrogen atom of the amino
or imidazole group and the carbon atom of the carboxyl or isoxazole
group. This study represents the first direct comparison of agonist
affinities, efficacies, and potencies on intact, nondesensitized
ligand-activated ion channels.
 |
Materials and Methods |
cDNA and cRNA Preparation.
The cDNA of the human
1 GABA
receptor subunit was cloned into the pALTER-1 vector (Promega, Madison,
WI) as previously described (Amin et al., 1994
). A silent mutation to
remove the EcoRI site within the gene was made by
site-directed mutagenesis (Promega) using the following mutagenic
oligonucleotide: 5' CTC ATT CAG GAG TTC CAC ACC ACC 3'. The gene was
then subcloned into the pGEMHE high expression vector (Liman et al.,
1992
) between EcoRI sites in the T7 orientation. The cDNA
was linearized with the NheI restriction enzyme, and capped
cRNA was transcribed by T7 RNA polymerase using standard in vitro
transcription procedures. The yield and integrity of the cRNA were
examined on a 1% agarose gel.
Oocyte Preparation and cRNA Injection.
Female Xenopus
laevis (Xenopus I, Ann Arbor, MI) were anesthetized by 0.2%
MS-222 (3-aminobenzoic acid ethyl ester, methanesulfonate salt). The
ovarian lobes were surgically removed from the frog and placed in
calcium-free oocyte Ringers-2 (OR2) incubation solution consisting of
92.5 mM NaCl, 2.5 mM KCl, 1 mM MgCl2, 1 mM
Na2HPO4, and 5 mM HEPES; 50 U/ml penicillin, and 50 µg/ml streptomycin, pH 7.5. The lobes
were cut into small pieces and digested with 0.3% collagenase A
(Boehringer Mannheim Biochemicals, Indianapolis, IN) with constant
stirring at room temperature for 1.5 to 2 h. The dispersed oocytes
were thoroughly rinsed with the above solution plus 1 mM
CaCl2. The stage VI oocytes were selected and the
follicular layer (if still present) was manually removed with fine
forceps. The oocytes were incubated at 18°C.
Micropipettes for cRNA injection were pulled from a borosilicate glass
(Drummond Scientific, Broomall, PA) on a Sutter P87 horizontal puller,
and the tips were cut with scissors to ~40 µm o.d. The cRNA
with dilution in diethyl pyrocarbonate-treated water (for
voltage-clamp) or without dilution (for binding) was drawn up into the
micropipette and injected into oocytes with a Nanoject microinjection
system (Drummond Scientific) at a total injection volume of 20 to 60 nl.
Electrophysiology.
One to 2 days after injection, the oocyte
expressing
1 GABA receptors was voltage-clamped at
70 mV. The
agonist-induced currents were in the range of 100 to 1000 nA, except
the I4AA-induced current, which had a maximum of 30 to 100 nA. The
dose-response relationships were determined by measuring the current
induced by a range of agonist concentrations. The
EC50 and Hill coefficient of the dose-response
relationship was determined by fitting the data to the Hill equation in
the following form:
|
(1)
|
where I is the current amplitude,
Imax is the maximum current amplitude for
that particular agonist ([A]), EC50 is the
agonist concentration that induces a 50% maximal response, and
n is the Hill coefficient.
Single Oocyte Binding.
Two to 3 days after injection, the
expression level of the
1 GABA receptors in oocytes were examined by
two-electrode voltage clamp at
70 mV. Oocytes with a current response
(to 10 µM GABA) of more than 3000 nA were selected for the binding
assay. Most of the oocytes tested had a maximum current amplitude of
4000 to 6000 nA. Details of the single oocyte binding have been
previously described (Chang and Weiss, 1999
). Briefly, the oocyte
expressing
1 GABA receptors was held by gentle suction at the end of
a sequencing gel loading pipette tip with a Pasteur bulb on the end.
The tip, bulb, and attached oocyte were held by a small clamp attached to a base. In this way, the oocyte could be moved manually between the
incubation, rinse, and dissociation solutions as follows. The oocyte
was first incubated in 1 µM [3H]GABA (in 100 µl of OR2) for 30 s at room temperature, then rinsed (to remove
unbound [3H]GABA) for 6 s in a 150 ml
0°C OR2 bath with constant stirring, and finally placed in 250 µl
of OR2 at room temperature for 60 s to let the bound
[3H]GABA dissociate. The 250 µl of OR2
containing the dissociated [3H]GABA was
thoroughly mixed with 4 ml of scintillation fluid, and the
radioactivity of each sample (cpm) was determined in a liquid
scintillation counter. For the measurement of the binding affinities of
each GABA receptor agonist, the unlabeled GABA receptor agonist was
added to the incubation solutions at increasing concentrations. Due to
the lack of desensitization of the
1 receptor, each oocyte could be
examined over the entire range of agonist concentrations without the
need for a recovery period between the test concentrations (Chang and
Weiss, 1999
). The IC50 (concentration of agonist
that decreases the [3H]GABA binding by 50%)
for each GABA receptor agonist was determined by least-squares fit of
the following relationship to the data:
|
(2)
|
where specific binding (B) is a function of the
inhibitor concentration ([I]). Bmax is
the maximum binding of 1 µM GABA in the absence of unlabeled agonist
and n is the slope factor.
The apparent dissociation constant Ki of an
unlabeled competing ligand was determined from the
IC50 using the following equation (Cheng and
Prusoff, 1973
):
|
(3)
|
where [L] is the concentration of the radiolabeled ligand and
Kd is the affinity of GABA to the receptor
[Kd = 0.65 ± 0.22 µM; (Chang
and Weiss, 1999
)]. Using this competition approach to derive the
Ki, we determined a value of 0.58 ± 0.03 µM for the displacement of [3H]GABA by
nonradioactive GABA. This agrees well with the value of 0.65 ± 0.22 µM determined from the more direct approach of measuring the
amount of binding as a function of [3H]GABA
concentration (Chang and Weiss, 1999
).
 |
Results |
EC50 Values and Maximum Currents for Different Agonists
on
1 Homomeric GABA Receptors.
Figure
1A are examples of currents induced by
TACA, GABA, muscimol, I4AA, CACA, and isoguvacine in oocytes expressing
1 homomeric GABAC receptors. The normalized
average dose-response relationships of these compounds are shown in
Fig. 1B. The continuous lines are least-squares fits of eq. 1 to the
data points. The resulting EC50 values and Hill
coefficients are provided in Table 1.
Clearly, these compounds activated the receptor with distinct
sensitivities of the order: TACA > GABA > muscimol > I4AA
CACA > isoguvacine.

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Fig. 1.
Dose-response relationships of TACA, GABA, muscimol,
I4AA, CACA, and isoguvacine, and efficacies on 1 homomeric GABA
receptor expressed in Xenopus oocytes. A, current traces
induced by these compounds. B, average dose-response relationships of
different agonists normalized to their own maxima. Continuous lines are
least-squares fit of eq. 1 to the data points. The resulting
EC50 values and Hill coefficients are in Table 1. C,
average dose-response relationships of different agonists normalized to
the maximum for GABA.
|
|
In the measurement of the dose-response relationships, we observed that
the maximal currents were different for the agonists (Table 1). Figure
1C is a plot of the dose-response relationship for each agonist
normalized to the maximum for GABA, rather than to its own maximum as
in Fig. 1B. As evidence indicates that different GABA receptor agonists
induce openings to the same conductance level (Mistry and Hablitz,
1990
), the data in Fig. 1C suggest that the maximum open probabilities
were different.
The Binding Affinities of the Agonists to
1 Homomeric GABA
Receptors Fall into Two Groups.
Using the single oocyte binding
technique in a competition assay (Chang and Weiss, 1999
), we determined
the apparent binding affinities of the different agonists in intact
oocytes. Figure 2 shows that nonlabeled
GABA agonists could reduce the specific binding of 1 µM
[3H]GABA to oocytes expressing
1 GABA
receptors in a concentration-dependent manner. Note that the
dose-inhibition relationships for TACA, GABA, and muscimol were very
similar, whereas CACA and isoguvacine required much higher
concentrations to displace the [3H]GABA. I4AA
displayed the highest apparent affinity and will be considered
separately in a later section. The continuous lines are
least-squares fits of eq. 2 to the data yielding
IC50 values and Hill coefficients (Table
2) for [3H]GABA
competition. The apparent binding affinities
(Ki) calculated from the
IC50 values (Cheng and Prusoff, 1973
) are
presented in Table 2. Note that the binding affinities of these
agonists can be divided into two groups: TACA, GABA, muscimol, and I4AA
have relatively high apparent binding affinities, whereas CACA and isoguvacine have significantly lower apparent affinities.

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Fig. 2.
Dose-dependent inhibition of the
[3H]GABA (1 µM) binding to 1 GABA receptors by
different GABA receptor agonists. Continuous lines are best fit of eq.
2 to the data points. Note that TACA, GABA, muscimol, and I4AA have
similar IC50 values, whereas CACA and isoguvacine need
significantly higher concentrations to inhibit [3H]GABA
binding.
|
|
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TABLE 2
IC50 values and Hill coefficients of the dose inhibition of 1 µM [3H]GABA binding by different nonlabeled ligands and
their Ki values
Values are mean ± S.D.
|
|
The Binding Affinities and EC50 Values of the
Agonists at
1 Homomeric GABA Receptors Are Correlated.
The
single oocyte binding technique allows us to measure binding under
similar conditions as the electrophysiological recording, and in the
same set of functional receptors. This has made it possible to directly
correlate binding and channel activation. Figure
3 is a plot of the
EC50 values of these agonists as a function of
their apparent dissociation constants (Ki).
The continuous line is from a linear regression to all the data
points excluding I4AA. The dashed line represents a theoretical exact
correspondence between these two parameters. Note that all data points
fall below the line. This difference may be due, at least in part, to
the requirement that multiple, probably three (Amin and Weiss, 1996
), agonist molecules must bind to open the GABAC
receptor.

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Fig. 3.
Relationship between EC50 and
Ki values. Continuous line is from a linear
regression to all the data points excluding I4AA. The dashed line is
the prediction assuming an equivalent EC50 and
Ki. Note that all data points are below the
line, indicating that the Ki values are
lower than the EC50 values.
|
|
The IC50 Values for I4AA Competition of GABA Binding
and GABA-Mediated Activation Are Similar.
I4AA exhibited the
greatest discrepancy between the EC50 and
Ki values among the agonists we examined
(Fig. 3). At the same time, I4AA displayed the lowest efficacy for
activation; the maximal I4AA-induced current was
2% of the maximal
GABA-induced current (Fig. 1C, Table 1). I4AA also exhibited the
highest apparent affinity of any of the compounds tested (Fig. 2, Table
2). Therefore, electrophysiologically, if coapplied with GABA, I4AA
should act like an antagonist. Figure 4
shows the dose-dependent inhibition of I4AA on the GABA-induced current
(1 µM GABA) and [3H]GABA binding. The
I4AA-mediated inhibition of the GABA-induced current (1 µM GABA)
demonstrated an IC50 value of 0.67 ± 0.10 µM (n = 5), which was similar to the
IC50 value measured in the competitive binding
assay: 0.39 ± 0.02 µM (n = 5).

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Fig. 4.
Comparison of the dose-dependent inhibition of the
GABA-activated current and GABA binding by I4AA. A, current traces of
I4AA inhibition of GABA-induced current. B, average dose-inhibition
relationships of I4AA on GABA-induced current ( ) and
[3H]GABA binding ( ). For the current, the I4AA
dose-dependent activation was subtracted from the data points.
|
|
 |
Discussion |
Activation Mechanism.
The activation mechanism of ligand-gated
ion channels includes both binding and gating steps. Investigation of
the coupling between binding and gating requires both radioligand
binding and electrophysiological recording techniques. We have
developed a single intact oocyte binding technique that allows us to
study binding and activation properties in functional receptors under identical experimental conditions. In addition, homomeric
1 GABA receptors do not desensitize, further simplifying the analysis of the
coupling between binding and channel activation. Using the single
oocyte binding technique to investigate the
1 GABA receptor, we have
already provided fundamental insights into the activation mechanism of
this receptor by GABA (Chang and Weiss, 1999
). Here, we have extended
the application of this technique to measuring the apparent binding
affinity for other GABA agonists on the recombinant
1
GABAC receptors in an attempt to directly correlate binding and activation of different agonists in functional, intact receptors.
We consider our data using the following
three-bind-to-open concerted kinetic scheme (Amin and Weiss, 1996
):
|
|
In this activation mechanism, pore opening requires three agonist
molecules bind to five equal and independent binding sites. In a
previous study, using a combination of single oocyte binding and
electrophysiology (Chang and Weiss, 1999
), we derived the following set
of rate constants: kon = 0.96 × 105
M
1s
1,
koff = 0.18 s
1,
= 3.6 s
1,
= 0.31 s
1.
Using this three-bind-to-open activation mechanism and the determined
rates, we investigated whether this proposed activation mechanism could
describe our data if we assume an identical affinity of the agonists
for the receptor
(koff/kon), but
variable gating kinetics (
and/or
). The dashed line on
the left in Fig. 5 plots the predicted
relationship between the EC50 and the maximum
current using the rate constants provided under Materials and
Methods, but with a varying opening rate. Thus, decreasing the
opening rate increased the EC50 and depressed the
maximum current. The filled symbols in Fig. 5 plot the experimental
EC50 values and maxima (normalized to GABA) for
the different agonists. TACA, GABA, muscimol, and perhaps I4AA fall
along this theoretical line, suggesting that an alteration in the
gating kinetics, with a fixed and identical affinity, could account for
the observed differences in the EC50. Clearly,
the proposed scheme with an agonist affinity identical with that of
GABA cannot account for CACA and isoguvacine. The most straightforward
interpretation is that these two agonists have a much lower affinity
for the receptor. The dashed line on the right is the predicted
relationship between EC50 and the maximum using
the same rate constants as for GABA, but the binding affinity was
75-fold less (kon = 1.3 × 103
M
1s
1). In sum,
our results have shown that the six different agonists fall into two
affinity classes at
1 homomeric GABAC
receptors. Because agonists within a class have a similar apparent
affinity, the difference in the EC50 values
relates to the ability of the agonists to activate the receptor once
bound.

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Fig. 5.
Relationship between the GABA-activated current
(normalized to the maximum for GABA) and the experimentally observed
EC50 values. The dashed lines represent the predicted
relationship between the maximum current and the EC50 using
the rate constants and three-bind-to-open kinetic model provided under
Materials and Methods. The dashed lines were produced by
holding all rate constants fixed and varying only the opening rate
( ). The shift along the abscissa for the two dashed lines results
from the different forward binding rates. The predicted
EC50 and maximum current for each set of parameters was
determined by using a Q-matrix algorithm to generate a dose-response
relationship, which was then fitted with eq. 1 (Colquhoun and Hawkes,
1981 ; Chang and Weiss, 1999 ). The dashed lines were generated by
holding all rates fixed except for (opening rate), which was varied
to produce the relationship between maximum activatable current and
EC50. The maximum for GABA is plotted as one, which is not
the efficacy because the maximum open probability for GABA is 0.92
(Chang and Weiss, 1999 ).
|
|
Although we have determined the Ki values
for these agonists, we have used the term "apparent
Ki values" throughout to distinguish this
parameter from the theoretical "true" dissociation constant, which
is the ratio of the off rate to the on rate for agonist. This is
because the measurement of the binding affinity is influenced by the
gating, or opening and closing, of the pore (Colquhoun, 1998
; Chang and
Weiss, 1999
). The extent to which the gating will influence the binding
will vary for the different agonists as these agonists certainly differ
in their ability to gate the receptor. This differential efficacy of
the agonists would also affect the observed
Ki values as determined by the
Cheng-Prusoff correction (eq. 3) and therefore the specific
Ki values must be interpreted with caution.
In a previous study, based on a simple activation mechanism, we were
able to determine the extent to which the gating influenced the binding
measurements (and vice versa) using GABA as the agonist.
Although one would like to repeat this type of analysis for the
other agonists, obtaining these compounds in a radiolabeled form is
cost-prohibitive (Chang and Weiss, 1999
).
Structure/Activity Relationship for the Agonists.
A
conformational analysis to explain the structure/activity relationships
of these GABA agonists for
1 receptors has been published (Kusama et
al., 1993
; Chebib and Johnston, 2000
). Using the nomenclature of
Kusama et al. (1993)
, the high affinity agonists GABA, TACA, muscimol,
and I4AA are in extended planar conformations when bound to
1
receptors (Fig. 6A). The lower affinity
agonist CACA is in a folded planar conformation and isoguvacine is in a
nearly planar conformation (Fig. 6B). For the un-ionized forms of the
agonists shown in Fig. 6, the distances from the nitrogen atom in the
amino or imidazole group (I4AA) to the carbon atom in the carboxyl or
isoxazole group (muscimol) vary between 4.29 and 5.02 Å. For the high
affinity agonists, the C
N distance varies from 4.63 to 5.02 Å. For
the low affinity agonists, the C
N distance varies from 4.29 to 4.51 Å. Thus, the high affinity agonists have a larger C
N distance than
the low affinity agonists.

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Fig. 6.
Three-dimensional structures of GABA agonists. The
conformations of the structures shown were generated using the CS Chem
3D Pro molecular modeling software from CambridgeSoft Corp., Cambridge,
MA. For clarity, hydrogen atoms are not shown. A, extended
conformations of GABA, TACA, muscimol, and I4AA. The distance between
the amino group nitrogen and the carboxyl group carbon in GABA (C N
distance) is 5.02 Å. The distances between the corresponding atoms in
TACA, muscimol, and I4AA are 4.90, 4.63, and 4.83 Å, respectively. B,
folded conformation of CACA and isoguvacine conformation. The C N
distances are 4.51 and 4.29 Å, respectively. C, superimposition of
muscimol on TACA. The intermolecular distances between the superimposed
nitrogen and carbon atoms of TACA (starting at N and ending with the
carboxyl C) and the corresponding atoms in muscimol are 0.14, 0.11, 0.22, 0.25, and 0.13 Å, respectively. D, a superimposition of I4AA on
TACA. The intermolecular distances, as defined in panel C, for the
TACA/I4AA superimposition are 0.03, 0.09, 0.21, 0.18, and 0.03 Å,
respectively. Part of the imazole ring of I4AA occupies a region of
space that is unoccupied by TACA and muscimol. E, a superimposition of
CACA and isoguvacine. The intermolecular distances, as defined in panel
C, for the TACA/I4AA superimposition are 0.11, 1.69, 0.49, 1.35, and
0.11 Å, respectively.
|
|
In Fig. 6, C and D, TACA is superimposed on muscimol and I4AA,
respectively. Part of the imidazole ring of I4AA, which has high
affinity but low efficacy, occupies a unique region of space that is
not occupied by the agonists TACA and muscimol. One possibility is that
this region of space is accessible when I4AA binds to the unopened
conformation of the receptor, but inaccessible when the receptor is in
the open conformation (i.e., the channel cannot open unless parts of
the receptor are allowed to move into the space occupied by part of the
imidazole ring of I4AA). This explanation also accounts for the
antagonist actions of I4AA.
The pKa of the imidazole group of I4AA is
7.46 (Bowery and Jones, 1976
). Hence, at pH 7.4 the imidazole ring of
I4AA is ~50% protonated, possibly only ~50% of I4AA is binding to
the
1 receptor, and the affinity of I4AA may be underestimated by
about 2-fold. Additionally, the delocalization of the positive charge
over the imidazolium ring could affect the affinity and efficacy of
I4AA.
Isoguvacine is a conformationally constrained molecule. The double bond
in the six-membered ring of isoguvacine and its conjugation with the
carboxylic acid group greatly flattens the ring. Although isoguvacine
does not mimic the conformation of CACA in the folded conformation, C
N distances for these molecules are similar and the structures are
easily superimposed as shown in Fig. 6E. We hypothesize that it is the
short C
N distance found in these molecules that is responsible for
the lower binding affinity of these compounds. As discussed previously
(Kusama et al., 1993
), steric hindrance caused by parts of the
heterocyclic ring of isoguvacine may also contribute to the low
affinity of isoguvacine.