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Vol. 60, Issue 5, 944-954, November 2001
Pharma Division, Preclinical Research, Nervous System Diseases, F. Hoffmann-La Roche Ltd., Basel, Switzerland
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Abstract |
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Metabotropic glutamate (mGlu) receptors are a family of
G-protein-coupled receptors that play central roles as modulators of
both glutamatergic and other major neurotransmitter systems in CNS.
Using molecular modeling, site-directed mutagenesis,
[3H]LY354740 binding, [35S]GTP
S binding,
and activation of GIRK current, we have been able to identify residues
crucial for the binding of LY354740 and glutamate to rat mGlu2
receptors. Several of the crucial residues located in the binding site
(Arg-57, Tyr-144, Tyr-216, Asp-295) have not been identified
previously. We propose that the
-carboxyl group of LY354740 forms
H-bonds to Arg-57, whereas the
-carboxyl group forms an H-bond with
the hydroxyl group of Ser-145. The
-amino group of LY354740 forms
H-bonds to Asp-295 and to the side-chain hydroxyl group of Thr-168. In
addition, Tyr-144 may establish a hydrophobic (C-H/
)-interaction
with the bicyclo-hexane ring of LY354740. Furthermore, the mutation of
residues Ser-148 and Arg-183, which are too remote for a direct
interaction, affected the ligand affinity dramatically. These results
suggest that Ser-148 and Arg-183 may be important for the 3D structure
and/or are involved in closure of the domain. Finally, Asp-146, which
is also remote from the binding site, was shown to be involved in the
differential binding affinity of [3H]LY354740 for mGlu2
versus mGlu3 receptors. All the mGlu receptors except mGlu2 are
activated by Ca2+ and have serine instead of aspartic acid
at this position, which suggests a critical role of this aspartic acid
residue in the binding properties of this unique receptor.
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Introduction |
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The majority of excitatory
synapses in the central nervous system employ glutamate as their
neurotransmitter. After its release, glutamate binds to and activates
two distinct classes of receptors, ionotropic (NMDA, AMPA, and kainate)
(Monaghan et al., 1989
; Nakanishi, 1992
) and metabotropic (mGlu) (Pin
et al., 1999
, Pellicciari et al., 2000
). The mGlu receptor family
comprises eight receptors that are divided into three classes on the
basis of their sequence similarities, signal transduction, and agonist
rank order of potency. Group I receptors (mGlu1 and -5) are coupled to
phosphoinositide hydrolysis; group II receptors (mGlu2 and -3)
are negatively coupled to cAMP production and are not stimulated by
L-(+)-2-amino-4-phosphono butyric acid (L-AP4);
and group III receptors (mGlu4, -6, -7, and -8) are also negatively
coupled to cAMP production but are activated by L-AP4 (Conn
and Pin, 1997
, Pin et al., 1999
, De Blasi et al., 2001
). Because of
their critical role as modulators of synaptic transmission, ion channel
activity, and synaptic plasticity (Nakanishi, 1994
, Anwyl, 1999
,
Holscher et al., 1999
), mGlu receptors are implicated in the pathology
of major neurological disorders such as Alzheimer's and Parkinson's
disease as well as depression, schizophrenia, anxiety, and pain
(Nicoletti et al., 1996
; Bruno et al., 1998
; Bordi and Ugolini, 1999
).
The mGlu receptors belong to a new family of G-protein coupled
receptors (GPCRs) designated family 3 (Bockaert and Pin, 1999
). The
other members of this family include the GABAB
receptor, the Ca2+-sensing receptor and putative
pheromone receptors (Bockaert and Pin, 1999
). They have an unusually
large extracellular amino-terminal domain (ATD) (~ 500 to 600 aminos
acids) with no sequence homology to other families of GPCRs. Although
the sequence homology among family 3 members is low (~ 20% amino
acid identity), they are structurally related. O'Hara et al. (1993)
observed the similarity between a region of the mGlu1 ATD and a family
of bacterial periplasmic amino acid-binding proteins, in particular the
leucine-, isoleucine- and valine binding protein (LIVBP) (Sack et al.,
1989
). Based on the crystal structure of LIVBP, they proposed a bilobal
structure for the agonist-binding pocket of mGlu receptors in which the glutamate is bound in a "venus flytrap" mechanism. Furthermore, mutagenesis studies verified that two residues, Ser-165 and Thr-188 of
mGlu1, were indeed crucial for binding to glutamate and quisqualate as
predicted by this model (O'Hara et al., 1993
). Using molecular modeling, site-directed mutagenesis, and chimeric receptors, many other
researchers have subsequently reported on the structural similarity of
the ligand-binding site of both NMDA receptors (Kuryatov et al., 1994
)
and iGlu receptors (Stern-Bach et al., 1994
) to the two lobes of the
bacterial lysine-arginine-ornithine binding protein. The recent X-ray
structure of the rat iGlu2 receptor extracellular domains (Armstrong et
al., 1998
) also strongly supports the mGlu/periplasmic amino
acid-binding protein-like model (O'Hara et al., 1993
) for the
glutamate-binding site. Furthermore, site-directed-mutagenesis of the
GABAB R1 (Galvez et al., 1999
) has identified
critical residues in the ligand-binding pocket, the localization of
which supports the "venus flytrap" model. Biochemical studies of
the purified extracellular ligand-binding region of mGlu1 (Okamoto et
al., 1998
), mGlu4 (Han and Hampson, 1999
), and, recently,
GABAB R1 (Malitschek et al., 1999
) have indicated
that these truncated soluble receptors retain ligand-binding properties
similar to wild-type receptors. However, compared with wild-type
receptors, the mGlu4 ATD displayed higher affinities for agonists and
lower affinities for antagonists (Han and Hampson, 1999
). Therefore, the amino acids involved in ligand binding must be localized in the ATD
of these receptors. The long-awaited crystal structure of the ATD of
the mGlu1 receptor complexed with glutamate has recently been reported
(Kunishima et al., 2000
) depicting a "clamshell"-like structure
similar to that found in X-ray structure of iGlu2 receptor (Armstrong
et al., 1998
) and LIVBP (Sack et al., 1989
).
In the present study, we used tritiated
(+)-2-aminobicyclo-[3.1.0]-hexane-2,6-dicarboxylate (LY354740), which
has a nanomolar potency at mGlu2 and -3 and no effect at mGlu1, -5, -8, -4 and -7 receptors up to 300 µM (Schoepp et al., 1997
; Schaffhauser et al., 1998
, Malherbe et al., 1999
, Schweitzer et al., 2000
). Its
selectivity, combined with site-directed mutagenesis and molecular modeling, provided a valuable tool to study amino acids involved in
agonist binding to mGlu2 and -3 receptors. Measurements of function
[GTP
35S binding and activation of
G-protein-coupled inwardly rectifying potassium channel (GIRK)
current] were performed to evaluate the consequences of mutations on
agonist efficacy and selectivity. In addition, the inhibitory effect of
two compounds derived from LY354740 were assessed on
[3H]LY354740 binding.
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Experimental Procedures |
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Materials.
(+)-
-Methyl-4-carboxyphenylglycine,
2S,2'R,3'R)-2-(2',3'-dicarboxycyclopropyl)glycine,
(+)- and (
)-LY354740, and
2-amino-bicyclo-[3.1.0]hex-3-ene-2,6-dicarboxylate were synthesized
at Hoffmann-La Roche Ltd by Drs. G. Adam and J. Wichmann.
[3H]LY354740 (specific activity, 35 Ci/mmol)
was synthesized by Dr. P. Huguenin at the Roche chemical and isotope
laboratories following a synthetic route devised by Dr. H. Stadler.
Guanosine-5'-O-(3-thiotriphosphate) (GTP
S) was obtained
from Sigma. L-Glutamate was from RBI/Sigma (Natick, MA). GTP
35S (specific activity, 1000 Ci/mmol) was obtained from Amersham Pharmacia Biotech (Piscataway, NJ).
Construction of Point-Mutants. cDNAs encoding the rat mGlu2 and mGlu3 receptors in pBlueScript II were generously given to us by Prof. S. Nakanishi (Kyoto, Japan). All point-mutants were constructed using the QuikChange site-directed mutagenesis kit (Stratagene, La Jolla, CA) according to the manufacturer's instructions and using pBlueScript II-mGlu2 (or -mGlu3) as a DNA template. Complementary 36-mer oligonucleotide primers (sense and antisense) containing the site of mutation in the middle were synthesized by Amersham Pharmacia Biotech. The following polymerase chain reaction conditions were used for repeated extensions of the plasmid template: 95°C for 1 min and 20 cycles of 95°C for 30 s, 55°C for 1 min, and 68°C for 18 min using 50 ng of plasmid DNA, 100 ng of each primer, and 2.5 units Pfu Turbo DNA polymerase (Stratagene). The entire coding regions of all positive point-mutants were sequenced from both strands using an automated cycle sequencer (Applied Biosystems, Foster City, CA). The cDNAs with positive point-mutants were then subcloned into the mammalian expression vector pcDNA3 (Invitrogen, Carlsbad, CA) downstream from the cytomegalovirus promoter.
Cell Culture, Transfection, and Membrane Preparation.
HEK-293 cells were maintained in minimum essential medium
supplemented with 100 µg/ml penicillin, 100 µg/ml streptomycin, 10 mM HEPES, and 10% fetal calf serum. Three days before transfection, the cells were seeded at high density (200,000 cells/ml). The transfection of various receptor point-mutants was performed using LipofectAMINE Plus reagent (Invitrogen) according to the
manufacturer's instruction. Six hours after transfection, the
DNA-transfection mixture was removed and the cells were maintained in
minimum essential medium with reduced L-glutamine
(0.4 mM final), 10% dialyzed fetal calf serum and the mGlu antagonist,
(+)-
-methyl-4-carboxyphenylglycine (0.32 mM final). After
48 h, the cells were harvested and washed three times with cold
PBS and frozen at
80°C. The pellet was suspended in cold 20 mM
HEPES-NaOH buffer containing 10 mM EDTA, pH 7.4, and homogenized with a
Polytron homogenizer (Kinematica AG, Basel, Switzerland) for 10 s
at 10,000 rpm. After centrifugation at 48,000g for 30 min at
4°C, the pellet was washed once with 20 mM HEPES-NaOH buffer
containing 0.1 mM EDTA, pH 7.4, respun and resuspended in a smaller
volume of a cold 50 mM Tris-HCl, 2 mM MgCl2
binding buffer at pH 7.4. The membrane suspension was frozen at
80°C before use. Protein content was measured using the Pierce
method (Socochim, Lausanne, Switzerland) using bovine serum albumin as
the standard.
[3H]LY354740 Binding.
After thawing, the
membranes were diluted in the binding buffer to a final assay
concentration of 25 µg of protein/ml. Saturation isotherms were
determined by addition of various [3H]LY354740
concentrations (1-1000 nM) to these membranes for 1 h at room
temperature. To analyze the effect of Ca2+ on the
mGlu2 wild-type receptor and D146S mutant, the saturation isotherms
were performed in the absence or presence of 2 mM
CaCl2. At the end of the incubation, membranes
were filtered onto Whatman GF/C glass fiber filters (Whatman,
Maidstone, UK) and washed five times with cold binding buffer.
Nonspecific binding was measured in the presence of 10 µM
2S,2'R,3'R)-2-(2',3'-dicarboxycyclopropyl)glycine. The radioactivity was measured by liquid scintillation counting after
transfer of the filter into plastic vials containing 10 ml of
Ultima-gold (Packard, Meriden, CT) in a Tri-Carb 2500 TR counter
(Packard). Saturation experiments were analyzed with the iterative
nonlinear curve fitting software Origin (Microcal Software Inc.,
Northampton, MA) using the rectangular hyperbolic equation derived from
the equation of a bimolecular reaction and the law of mass action,
B = (Bmax × [F])/(KD + [F]), where B is
the amount of ligand bound at equilibrium,
Bmax is the maximum number of binding
sites, [F] is the concentration of free ligand, and
KD is the ligand dissociation constant. The
experiments were performed at least three times in triplicate and the
mean ± S.D. of the individual KD
values were calculated and are reported in the Table 1. For inhibition experiments, membranes
containing the wild-type receptor or the Y144S mutant of the mGlu2
receptor were incubated with 10 or 100 nM
[3H]LY354740 (for wild-type and Y144S,
respectively) and various concentration of the inhibitory compound.
IC50 and Hill coefficient values were derived
from the inhibition curve and Ki values were calculated
according to the equation Ki = IC50/(1+[L]/KD) where [L] is the concentration of [3H]LY354740 and
KD is its dissociation constant at the
receptor, derived from the saturation isotherm.
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GTP
35S Binding.
This assay was essentially
performed as described previously (Cartmell et al., 1998
). Briefly,
after thawing, the membranes were washed once and resuspended in cold
20 mM HEPES-NaOH buffer containing 10 mM MgCl2
and 100 mM NaCl, pH 7.4. Wheat germ agglutinin scintillation proximity
assay beads (RPNQ0001; Amersham) were suspended in the same
buffer (40 mg of beads/ml). Membranes and beads were mixed (beads: 13 mg/ml; membranes: 200 µg of protein/ml) and incubated with 2 µM GDP
at room temperature for 1 h, with mild agitation.
GTP
35S binding was performed in 96-well
microplates (picoplate; Packard) in a total volume of 180 µl with 15 µg of membrane protein and 0.3 nM GTP
35S.
Nonspecific binding was measured in the presence of 10 µM cold GTP
S. In order to study the effect of glutamate and LY354740, GTP
35S binding was stimulated with various
concentrations of glutamate (1 to 300 µM) or of LY354740 (1 to 300 nM). Plates were sealed and agitated at room temperature for 2 h.
The beads were then allowed to settle and the plate counted in a
Top-Count (Packard) using quench correction. The stimulation curves
were fitted with a four parameter logistic equation giving
EC50 values and Hill coefficients. The
experiments were performed at least three times in triplicate and the
mean ± S.D. of the EC50 values was
calculated. Unfortunately, we were unable to set up conditions to
measure reliably the stimulatory effect of agonists using membranes
from mGlu3 transfected cells.
Electrophysiology.
A Chinese hamster ovary (CHO) cell line
stably expressing human GIRK1-GIRK2 dimer was cotransfected with a 1:1
(w/w) mixture of mGlu2:enhanced green fluorescent protein plasmids
using LipofectAMINE 2000 (Invitrogen). GIRK channel currents were
recorded 24 to 96 h after cell transfection using the whole-cell
configuration of the patch-clamp technique. Pipettes were pulled from
borosilicate glass with resistances from 2 to 3 M
, when filled with
a solution containing 130 mM KCl, 1 mM MgCl2, 10 mM HEPES, 5 mM K4BAPTA, 3 mM
Na2ATP, 0.3 mM Na2GTP, 5 mM
D-Glucose, adjusted to pH 7.2 with KOH, and osmolarity
adjusted to 310 mOsM with sucrose. The cells were superfused
with a solution containing 149 mM NaCl, 3.25 mM KCl, 2 mM
CaCl2, 2 mM MgCl2, 10 mM
HEPES, 11 mM D-Glucose, adjusted to pH 7.4 with NaOH, and
osmolarity adjusted to 340 mOsM with sucrose. For GIRK channel current
recordings, external Na+ was replaced by an equal
amount of K+ to reach 30 mM
K+. Whole-cell currents were amplified with an
Axopatch 200A amplifier (Axon Instruments, Foster City, CA), filtered
at 1 KHz and acquired at 500Hz with a Digidata 1200A-acquisition board
(Axon Instruments) for subsequent storage on a Dell personal computer.
Cells were held at
70 mV and the recordings were made under
conditions in which K+ currents would be inward
([K+]i = 150 mM,
[K+]o = 30 mM).
Western Blot. For Western blot analysis, 1 µg of membrane proteins were resuspended in Laemmli buffer containing 20 mM dithiothreitol and heated at 50°C for 5 min. Proteins were separated by 7% SDS-polyacrylamide gel and electroblotted onto a polyvinylidene difluoride membrane. After blocking, the blot was incubated with a mGlu2/3 commercially available antibody (AB 1553; Chemicon, Temecula, CA), in Tris-buffered saline/Tween-20 supplemented with 1% low-fat dry milk, for 1 h at room temperature. A horseradish peroxidase-conjugated sheep anti-mouse antibody (Amersham Pharmacia Biotech) was used as a second antibody at a dilution of 1:400 in Tris-buffered saline/Tween-20 supplemented with 1% low fat dry milk, and was incubated with the filter for 30 min at room temperature. The signal was revealed using the Lumi-Light Western Blotting Kit (Amersham Pharmacia Biotech).
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Results |
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Generation of Point Mutations and Their Expression in HEK-293
Cells.
A model of the extracellular part of rat mGlu2 was built by
homology to a bacterial periplasmic binding protein (Escherichia coli leucine/isoleucine/valine binding protein, LIVBP, PDB code 2liv, http://www.rcsb.org/pdb) (Sack et al., 1989
). Distant sequence
similarity between both proteins has been detected previously (O'Hara
et al., 1993
). We have confirmed this relationship by using PSI-Blast
(Altschul et al., 1997
). Our sequence alignment between LIVBP and mGlu2
is essentially the same as that of O'Hara et al. (1993)
. Figure
1 shows the alignment of rat mGlu
receptors and their limited sequence homology (<20%) to bacterial
Leu/Ile/Val-binding protein. To determine the amino acid residues that
control glutamate and LY354740 affinity, efficacy and selectivity, 23 point mutations, 21 in mGlu2 and 2 in mGlu3, were introduced by
site-directed mutagenesis. Because the Ser-165 and Thr-188 of mGlu1
receptor have been shown previously to be crucial for the binding to
glutamate, our mutated residues were chosen from two regions proximal
to these residues (Fig. 1). The model also predicted that the residues
Arg-57 and Asp-295 might be located in the binding pocket. For mutants
that did not bind [3H]LY354740, cell membrane
preparations were subjected to immunoblotting using an anti-mGlu2/3
antibody. For these mutants and for the wild-type receptor, an
immunoreactive band around 100 kDa was detected that was absent in the
mock-transfected cell membranes, demonstrating the expression of the
mutant receptors in the transfected cells (Fig.
2). Additionally, strong bands around 200 kDa were detected that are most likely to be receptor dimers.
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Effect of Point Mutations on the [3H]LY354740
Binding.
The [3H]LY354740 (Fig.
3A) saturation isotherms for the mGlu2
and -3 wild-type and selected mutated receptors are shown in Fig.
4 and the dissociation constants and
maximum number of binding site (Bmax) in
Table 1. For the mGlu2 receptor, six mutations (Y144F, A166S, S167A,
S169A, S164A, and R271A) did not significantly affect the ligand
affinity compared with the wild-type mGlu2 receptor (Table 1). However,
the mutations S145A, R57A, R57K, R57Y, Y216A, Y216F, D295A, and D295R
completely abolished [3H]LY354740 binding. The
mutation S148A led to a dramatic reduction in
[3H]LY354740 affinity, although the effect was
less marked than observed with the eight previous mutations. Two other
mutations, T168A and R183A, led to 21- and 11-fold decreases in
affinity, respectively (Fig. 4A, Table 1). The conversion of the
tyrosine 144 to an alanine (Y144A) or a serine (Y144S) led to a
statistically significant 10-fold decrease of
[3H]LY354740 affinity (P < 0.05, Student's t test; Fig. 4A, Table 1). The conversion
of this tyrosine to a glycine (Y144G) also led to a statistically
significant 6-fold reduction in affinity (P < 0.05, Student's t test). However, its conversion to a
phenylalanine (Y144F) had no effect on
[3H]LY354740 affinity (Table 1). Replacing the
aspartic acid in position 146 with a serine (D146S) led to a
significant decrease of affinity (75 ± 13 versus 20 ± 2 nM,
for the mutant and the wild-type mGlu2 receptor, respectively,
p < 0.01 Student's t test, Fig. 4A) and
the affinities of this mGlu2 mutant and the wild-type mGlu3 receptor
were not statistically different. Interestingly, the addition of 2 mM
CaCl2 had no effect on the wild type mGlu2 saturation isotherm, but had a tendency to increase the affinity of
[3H]LY354740 for the D146S mutant
(KD values of 20 ± 2 and 18 ± 6 for the wild-type and 75 ± 18 and 42 ± 5 nM for the mutant
receptors in the absence or presence of 2 mM
CaCl2, respectively). The conversion of the
serine residue at position 152 of the mGlu3 receptor to an aspartic
acid (S152D), which corresponds to the reciprocal mutation performed in
the mGlu2 receptor (D146S), led to a significant increase of
[3H]LY354740 affinity for the mutant
(KD values of 82 ± 7 and 27 ± 2.5 nM for the wild-type and the mutant receptors, respectively, P < 0.01, Student's t test, Fig. 4B). The
affinities of the S152D mGlu3 mutant and of the wild-type mGlu2
receptors were not significantly different. Moreover, the conversion of
this serine 152 to a histidine residue (S152H) did not change the
affinity of the mutant compared with the wild-type mGlu3 receptor
(KD value of 76 ± 4 nM; Fig. 4B).
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Inhibition of [3H]LY354740 Binding by LY354740
Derivatives.
LY354740 was able to inhibit fully the binding of the
labeled compound to the wild-type receptor and Y144S mutant mGlu2
receptor, with Ki values of 0.013 ± 2 and 0.33 ± 0.03 µM, respectively. As might be predicted from
the study of Monn et al. (1997)
, the corresponding (
)-enantiomer of
LY354740 (Fig. 3B) was completely inactive. In addition,
2-amino-bicyclo-[3.1.0]hex-3-ene-2,6-dicarboxylate (Fig. 3C)
inhibited the binding of [3H]LY354740 to the
wild-type receptor with a Ki value of
0.63 ± 0.06 µM, whereas it inhibited the binding of the labeled
compound to the Y144S mutant with a Ki
value of 1.5 ± 0.05 µM.
Glutamate- and LY354740-Stimulated GTP
35S
Binding.
The functional effect of receptor activation was measured
with the wild-type and selected mutant mGlu2 receptors using glutamate- and LY354740-stimulated GTP
35S binding to the
membranes of the transfected cells (Fig.
5, Table 2). In a test using membranes from cells
expressing the wild-type mGlu2 receptor, glutamate and LY354740 induced
a concentration-dependent increase in GTP
35S
binding that corresponded to nearly a doubling of the
GTP
35S binding in absence of agonist with
glutamate and to a somewhat lower level of stimulation for LY354740.
The EC50 values were 3 ± 1 µM and 28 ± 4 nM for glutamate and LY354740, respectively.
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Effect of Point Mutations on the GIRK Channel Current.
Members
of the GPCR superfamily coupling through Go/Gi activate
heterotetrameric G-protein-coupled GIRKs through a fast,
membrane-delimited pathway involving the 
subunits of
heterotrimeric G-proteins. As shown previously for dopamine D2L- and
D3- (Kuzhikandathil et al., 1998
) and for mGlu receptors (Saugstad et
al., 1996
), GIRK activation by GPCRs can be used to assess
pharmacological properties of GPCRs. Therefore, we transiently
expressed the wild-type and selected critical point mutants of the
mGlu2 receptor in a CHO line stably expressing concatenated GIRK1-GIRK2
channels. The concentration-response curves for GIRK current evoked by
the glutamate and LY354740 are illustrated in Fig.
6; their derived Imax, pEC50, and Hill
coefficient (nH) values are shown in Table 3. The concentration-response curves of
glutamate and LY354740 obtained from cells expressing the mutated
receptors were all shifted to the right (Fig. 6), reflecting a decrease
in potency. The maximum currents were not significantly different for
most mutations. Receptors carrying the D295A mutation were insensitive to glutamate and LY354740. The R183A mutation led to a loss in potency
for glutamate and LY354740 and to lower Hill coefficients. Interestingly, mGlu2 receptors with the R183A mutation induced GIRK
currents with a slower activation kinetic than that observed with
wild-type mGlu2 receptors (data not shown). This suggests a regulatory
role of Arg-183 in the agonist-induced conformational change of the
mGlu2 receptor.
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Molecular Modeling of the ATD Domain of the mGlu2 Receptor.
As
we described briefly above, we initially constructed a model of the
mGlu2 ATD region by homology to the LIVBP (PDB code 2liv). Despite the
limited homology (<20%), the model predicted many important residues.
The recent publication of the X-ray structure of mGlu1 ATD region
(Kunishima et al., 2000
), with a 44% identity in the area of interest,
offered an alternative template. Based on this crystal structure of
mGlu1 (PDB code 1ewk), a 3D model of rat mGlu2 was built that starts at
Lys-23 and ends at Pro-486. The segment Ala-108 to Pro-133 is not part
of the model because the corresponding segment in mGlu1 is missing from
the crystal structure. The alignment between mGlu1 and mGlu2 is obvious
and none of the insertions/deletions seem to be near the binding site of the ligand. Where possible, the torsion angles of the amino acid
side chains were kept similar to those in the crystal structure; otherwise, they were optimized in the Moloc force field (Gerber and
Mueller, 1995
). The model does not contain water molecules.
representation of the homology model of mGlu2 is shown in Fig.
7. LY354740 has been docked in the cleft
between both domains of the ATC. Amino acids discussed in this work are
highlighted. According to our model, they can be divided into two
groups: (1) amino acids that are directly involved in the binding to
glutamate and (2) amino acids that contribute to the overall stability
of the three-dimensional structure of the domain and/or are involved in
the closing mechanism.
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Discussion |
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In the present work, we used site-directed mutagenesis and molecular modeling of group II mGlu receptors to elucidate critical residues involved in glutamate and LY354740 affinity and efficacy.
In general, all the mGlu2 receptor mutations resulted in a decrease of
affinity for [3H]LY354740. However, three mGlu2
mutations, A166S, S167A, and S169A, which are all located in the
vicinity of Thr-168, had no significant effect on either
[3H]LY354740 affinity or glutamate affinity and
efficacy in a functional assay. Previously, the mutation S181A in
mGlu4a, which corresponds to Ser-167 of mGlu2, was reported to have
only a moderate effect on L-AP4 affinity (Hampson et al.,
1999
).
Amino Acids Directly Involved in the Agonist Binding Site.
In
an earlier study (O'Hara et al., 1993
), it was demonstrated that the
conversion of Ser-165 and Thr-188 of mGlu1 receptor (Ser-145 and
Thr-168 in mGlu2) into alanine decreased the glutamate potency by 100- and 10,000-fold, respectively. In good agreement, we observed that both
S145A and T168A mutations completely abolished glutamate- and
LY354740-stimulated functional responses, although the T168A mutation
decreased [3H]LY354740 affinity by only
21-fold. Recently, Hampson et al. (1999)
, probing the ligand-binding
domain of the mGlu4a receptor, demonstrated that the two residues
Ser-159 and Thr-182 (Ser-145 and Thr-168 in mGlu2) are also important
molecular determinants for the binding of the agonist
L-AP4. Similarly, the investigation of the agonist-binding
domain of the other GPCR family 3 members has led to the conclusion
that the Ser-147 and Ser-170 of Ca2+-sensing
receptor (Brauner-Osborne et al., 1999
) and the Ser-246 and Ser-269 of
GABAB R1 (Ser-145 and Thr-168 in mGlu2) (Galvez et al., 1999
) are key residues of the agonist-binding pocket. Indeed,
this pocket is highly conserved and displays a similar structure among
this subfamily of GPCRs. Our model of the mGlu2-LY354740 binding domain
shows that the
-carboxyl group of LY354740 can form an H-bond
with the hydroxyl group of Ser-145, whereas the
-amino group
forms H-bonds with the side-chain hydroxyl group of Thr-168, both of
which are amino acids that are conserved in all types of rat and human
mGlu receptor.
-interactions. In agreement with
this hypothesis, the affinity of
2-amino-bicyclo-[3.1.0]hex-3-ene-2,6-dicarboxylate was only 2.4-fold
less for the Y144S mutant than for the wild-type receptor whereas
LY354740 affinity was 11-fold less for this mutant receptor, suggesting
that the interaction with the tyrosine was already lost for the former
compound. Indeed, replacing the tyrosine 144 with a phenylalanine had
no effect on the affinity of [3H]LY354740.
These observations indicate that the forces involved in the interaction
of LY354740 with this tyrosine are direct C-H/
interactions rather
than the indirect Van der Waals.
In our model, the
-carboxyl group of LY354740 forms H-bonds to
Arg-57, a residue that is not conserved in all rat mGlu receptors. mGlu2 and -3 receptors, which show the highest affinity for the LY354740 agonist, have an arginine at this position. mGlu8 and -4 receptors, which show a reduced affinity, have a lysine, whereas mGlu1
and -5 receptors, having the weakest affinity, have a tyrosine at this
position. The mutations of Arg-57 to alanine, lysine, or tyrosine all
led to the complete disappearance of
[3H]LY354740 binding. As expected, the R57A
mutation also resulted in 340-and 142-fold increased
EC50 values for glutamate and LY354740, respectively, as assayed by electrophysiology.
When the closure of the venus flytrap around LY354740 was simulated, it
became apparent that Asp-295 would come into sufficient proximity to
have an important interaction with the agonist. It also showed that the
-amino group of LY354740 can form H-bonds to Asp-295, a residue
conserved in all mGlu receptors. In agreement, the mutation of this
residue (D295A or D295R) virtually eliminated the binding of the ligand
to the receptor and led to a very large increase in
EC50 values of glutamate (>1000 µM) and
LY354740 (>10 µM) in the electrophysiological assay.
Two residues, Tyr-216 and Arg-271, which correspond to Tyr-236 and
Glu-292 in mGlu1, respectively, were predicted by the mGlu1 3D
structure to interact with glutamate (Kunishima et al., 2000
interactions. In the mGlu1 3D
structure, Tyr-236 (Tyr-216 in mGlu2) makes an H-bond to Asp-318
(Asp-295 in mGlu2), which binds the
-amino group of the ligand. The
binding partners of kainate at the iGlu2 receptor derived from X-ray
crystal structure (PDB 1gr2) (Armstrong et al., 1998Amino Acids That Contribute to the Overall Stability of the 3D
Structure of the Domain and/or Are Involved in the Closing
Mechanism.
Ser-148 was identified as an important residue for the
binding of [3H]LY354740 to mGlu2 receptor.
Mutagenesis of Ser-148 to alanine drastically decreased the affinity of
LY354740 for mGlu2 receptor. Surprisingly, in both models, Ser-148 is
located too far from the binding pocket for any direct interaction with
the ligand. According to the 3D model, Ser-148 (Ala-168 in mGlu1) is
positioned near Ser-164 (Ala-184 in mGlu1) and Ser-167 (Ala-187 in
mGlu1). However, further mutational analysis showed that the mutations S164A had no effect and S167A decreased
[3H]LY354740 affinity by only 3-fold. We
suggest that this Ser-148, which is positioned on a
-sheet
structure, might act as a relay stabilizing the 3D-conformation of the
domain and/or promoting its closure.
Comparison of the Agonist Binding Sites of mGlu1 and mGlu2
Receptors.
In the present study, the crucial residues were
identified on the basis of a mGlu2 model built on the 3D structure of
LIVBP. The sequence identity between the amino-terminal domain of the mGlu1 and mGlu2 receptors is 44%. Recently, the availability of atomic
coordinates of the mGlu1 ATD complexed with glutamate (Kunishima et
al., 2000
) provided an alternative template for modeling of the mGlu2
ATD, allowing their comparison. Of the 21 residues located at a
distance of 6 Å from glutamate in the binding pocket, 11 differ
between mGlu1 and mGlu2 receptors. Among the residues shown in the
mGlu1 crystal structure to interact directly and/or via a water
molecule with glutamate, Arg-78, Ser-165, Thr-188, Asp-208, Tyr-236,
and Asp-318 (Arg-61, Ser-145, Thr-168, Asp-188, Tyr-216, and Asp-295,
respectively, in mGlu2) are identical in all mGlu receptors. That other
residues, such as Tyr-74 (Arg-57 in mGlu2), Ser-164 (Tyr-144 in mGlu2),
Ser-186 (Ala-166 in mGlu2), and Glu-292 (Arg-271 in mGlu2), are
different might be critical for imparting ligand specificity to mGlu receptors.
-
and
-carboxyl groups of glutamate via H2O-46
and H2O-17 links, respectively. Interestingly,
the mutations of corresponding residues Ala-166 and Arg-271 in mGlu2
had limited effect on agonist affinity. The new mGlu2 model also shows
that Ser-148 (Ala-168 in mGlu1), an important residue for LY354740
binding, is positioned too remotely for a direct interaction with the
ligand. Unfortunately, the low resolution in this vicinity prevents a
clear understanding of how the ligand affinity and efficacy could be
affected so dramatically by this Ser-148.
Although the crystal structure of mGlu1 confirms many of our findings,
including the role of Arg-57 and Asp-295, a better appreciation of the
relative importance of other critical residues identified in our study
will not be feasible until the X-ray crystal structure of the mGlu2
receptor extracellular domain complexed with agonist molecules has been determined.
| |
Acknowledgments |
|---|
We thank Prof. S. Nakanishi (Kyoto University, Kyoto, Japan) for the mGlu2 and -3 receptor cDNA clones, Prof. F. Diederich for invaluable advice and discussion on the model, Drs. J. G. Richards and J. N. C. Kew for their critical reading of the manuscript. We are grateful to Rachel Fimbel, Agnès Nilly, Sylvie Chaboz, Daniele Buchy, Veit Metzler, and Klaus Christensen for their excellent technical assistance.
| |
Footnotes |
|---|
Received December 19, 2000; Accepted August 6, 2001
Vincent Mutel, Dept. PRBN-P, Bldg. 70/326, F. Hoffmann La-Roche Ltd., CH-4070 Basel, Switzerland. E-mail: vincent.mutel{at}roche.com
| |
Abbreviations |
|---|
NMDA, N-methyl-D-aspartate;
AMPA, (S)-amino-3-hydroxy-5-methyl-4-isoxazolepropionic acid;
mGlu, metabotropic glutamate;
L-AP4, L-(+)-2-amino-4-phosphono butyric acid;
GPCR, G-protein-coupled receptor;
ATD, amino-terminal domain;
LIVBP, leucine/isoleucine/valine-binding protein;
iGlu, ionotropic glutamate;
GABAB,
-aminobutyric acid, type B;
LY354740, (+)-2-aminobicyclo-[3.1.0]-hexane-2,6-dicarboxylate;
GIRK, G-protein
coupled inwardly rectifying potassium channel;
GTP
S, guanosine-5'-O-(3-thiotriphosphate);
HEK, human
embryonic kidney;
CHO, Chinese hamster ovary;
BAPTA, 1,2-bis(2-aminophenoxy)ethane-N,N,N',N'-tetraacetic
acid;
3D, three-dimensional.
| |
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