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The Nobel Institute for Neurophysiology, Department of Neuroscience, Karolinska Institutet, Stockholm, Sweden (J.N., P.Å.); and Institut für Physiologie, Münster, Germany (M.M.).
Received July 18, 2002; accepted March 10, 2003
| Abstract |
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The blocking mechanism has been described as a complex state-dependent
process in both Na+ (Hille,
1977
,
2001
;
Hondeghem and Katzung, 1977
;
Butterworth and Strichartz,
1990
) and K+ channels
(Valenzuela et al., 1995
),
with binding preferentially in open or in inactivated channel states. Several
binding sites have been proposed in both Na+
(Hille, 2001
) and
K+ channels (Longobardo et al.,
2000
), but the most extensively discussed hypothesis assumes a
single site, located in the internal pore mouth
(Lipka et al., 1998
;
Hille, 2001
), early postulated
to be delimited by the S6 helix and the P-loop. The importance of S6 for the
binding has been confirmed for both Na+ and K+ channels
(Ragsdale et al., 1994
;
Franqueza et al., 1997
).
The molecular details of the blocking process are poorly known. The
crystallization of the KcsA channel (Doyle
et al., 1998
), however, has opened up new possibilities to
investigate these processes in K+ channels, including molecular
dynamics simulations (Åqvist and
Luzhkov, 2000
).
To prepare the ground for such attempts, and to better understand the
clinical side effects mentioned above, we analyzed the effects of bupivacaine
on a series of wild-type Kv channels (Kv1.1, -1.2, -1.5, -2.1, -3.1, and -3.2)
expressed in Xenopus oocytes. Besides the reasons listed above, there
are further advantages with using the mentioned set of K+ channels.
They have relatively slow and simple kinetics and do not show fast
inactivation (making it possible to study the binding without complications
caused by competition from the inactivation particle). They are structurally
variable in the pore region, making our approach a natural site-directed
mutagenesis. They also show differential sensitivity to general anesthetics
(Harris et al., 2000
).
The results showed that bupivacaine at room temperature causes a time-dependent block of the studied Kv1 and Kv3 channels, and a time-independent block on Kv2.1. However, a time-dependent effect on Kv2.1 was seen at 32°C. Analysis of the effects of replacing residues in Kv2.1 by corresponding Kv1.2 residues (Fig. 1, A and B) in the internal vestibule delimiting structures (the S6 helix and the S5-S6 linker), showed that N-terminal end substitutions in S6 introduced Kv1.2 features with respect to the bupivacaine block. P-loop substitutions decreased the affinity of bupivacaine 5-fold.
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The results suggest that bupivacaine blocks Kv channels by an
open-statedependent mechanism. The data are consistent with a binding
site located in the internal vestibule. Numerical simulations suggest that the
effect on Kv2.1 deviates from that on the other channels in allowing a partial
closure of the channel in bound state. The mutational experiments suggest that
residues in the descending P-loop and the upper part of S6 are critical for
the binding, most likely by an allosteric mechanism. A simple mechanistic
scenario explaining the observations is presented. One crucial feature of this
scenario is the small distances between the critical residues and the
conserved glycine residue in the S6 helix recently shown to act as a gating
hinge (Jiang et al., 2002
;
Yifrach and MacKinnon, 2002
).
Thermodynamic considerations suggest that the interaction between bupivacaine
and the channels is hydrophobic.
| Materials and Methods |
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For cRNA synthesis, the corresponding plasmid DNAs were linearized. The transcription reactions were performed using a commercial kit (mMessage mMachine; Ambion, Austin, TX) and T7 RNA polymerase. Oocytes of the South African clawed toad (Xenopus laevis) were used as expression system. Oocytes in stage V or VI were isolated manually from the ovary and injected with the cRNA dissolved in distilled water at a concentration of 0.5 ng/oocyte (non-Kv2.1 channels) or 0.01 ng/oocyte (Kv2.1). The injected oocytes were maintained at 20°C until used for experiments. The electrophysiological experiments were performed 3 to 5 days after injection of cRNA.
Electrophysiology. The investigations were performed with a
two-electrode voltage-clamp technique, modified to include a
concentration-clamp technique (Madeja et
al., 1991
). The pipettes used were of borosilicate glass
(Hilgenberg, Malsfeld, Germany) with a resistance of 0.5 to 1 M
when
filled with 3 M KCl. Data acquisition and analysis were made with pCLAMP
software (Axon Instruments, Union City, CA). The holding potential was
80 mV and currents associated with steps in increments of 10 to +60 mV
were recorded before and after application of bupivacaine in various
concentrations (see below).
A high cRNA concentration was used for injection to obtain a high channel
density. The consequent series resistance problem was avoided by making the
critical measurements at relatively low currents. The volume resistance of the
external solution between membrane and ground was estimated to be between 0.1
and 1 k
. The resulting voltage error in measurements of midpoint values
and of blocking time courses was estimated to be less than 1 mV. The
relatively long settling time of the potential steps (partly because of the
large membrane capacitance; Finkel and
Gage, 1985
) clearly depended on the size of the current. The
resulting error was negligible at currents below 5 µA and, consequently, in
the measurements at the used bupivacaine concentrations. However, it affected
the control currents at high potential steps. We therefore discarded the first
2 ms of these recordings in the quantitative analysis. The results are given
as mean ± S.D.
Solutions. The tissue culture solution was a modified Barth medium (88 mM NaCl, 1 mM KCl, 1.5 mM CaCl2, 2.4 mM NaHCO3, 0.8 mM MgSO2, and 5 mM HEPES, pH 7.4, which was supplemented with penicillin (100 IU/ml) and streptomycin (100 µg/ml). The electrophysiological experiments were made with two types of solution, normal Ringer's solution and high [K+] solution. The latter type was used for investigating tail currents. The composition of the control Ringer's solution was 115 mM NaCl, 2 mM KCl, 1.8 mM CaCl2, and 10 mM HEPES, pH 7.2. The composition of the control high [K+] solution was 2.5 mM NaCl, 120 mM KCl, 1.8 mM CaCl2, and 10 mM HEPES, pH 7.2. The test solutions consisted of bupivacaine (Sigma Chemical Co, St. Louis), added to the control solutions in concentrations of 30, 100, 300, and 1000 µM.
To investigate the possibility of external binding sites, bupivacaine was in some experiments replaced by the permanently charged analogs LEA-113 (bupivacaine analog), LEA-120 (lidocaine analog), and RAD-250 (mepivacaine analog) in concentrations up to 1000 µM. The analogs were gifts from Astra (Södertälje, Sweden).
Data Analysis. The time course of the block was quantified by fitting a sum of two exponentials to the current recordings in the time window 2 to 500 ms with a nonlinear correlation procedure (Chebyshev method; pCLAMP software, Axon Instruments).
The steady state K+ conductance g(V) was
calculated as
![]() | (1) |
The dose-response curves were fitted to the equation
![]() | (2) |
Kinetic and Structural Model Simulations. To describe the
experimental results, we used the kinetic schemes described under
Results. They were solved numerically and fitted to the experimental
data. Scheme 1 will briefly be
discussed below. The extended version,
Scheme 2, was solved
correspondingly. Scheme 1 is
described by the following system of differential equations:
![]() |
![]() | (3) |
![]() |
![]() | (4) |
![]() |
V F/R T) multiplied with the unblocking rate constant
.
is the fraction of the field sensed by the charged
bupivacaine molecule in its blocking action (the electrical distance).
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Eq. 3 was solved by a simple Euler integration method. The time interval
used was 10 µs. For the cases (Kv1.1, -1.2, and -3.2) in which the
g(V) curves showed a clear saturation level within the
investigated voltage range (<+60 mV), the electrical distance
could
be directly estimated from the g(V) curve by fitting the
experimental data to the following equation:
![]() | (5) |
| Results |
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Figure 3 shows the concentration dependence of the steady-state reduction for each channel investigated, measured at +60 mV and 500 ms. Each data point represents mean values from 4 to 12 cells. Fitting Eq. 2 to the data gives dissociation constants in the range 110 to 240 µM and Hill coefficients in the range 1.0 to 1.4 for the different channel types, suggesting 1:1 reversible reactions between bupivacaine and the channel protein (see Table 1).
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Time-Dependent Effects Suggest an Open-StateDependent Mechanism. The time-dependent current reduction evident in the non-Kv2.1 channels suggests that a considerable fraction of the bupivacaine molecules binds to the channel preferentially when it is open. To determine whether such a mechanism could fully describe the block, we used a simple kinetic scheme (Scheme 1). The scheme can easily be extended to include several closed states to better fit the experimentally observed activation phase. However, the experimental resolution of this phase was limited because of the frequency response of the amplifier system (see Materials and Methods), and we found it sufficient for the present purpose to use the simpler Scheme 1.
Time Course Analysis. We thus fitted
Scheme 1 (by fitting numerical
solutions of Eq. 3) simultaneously to the experimental data (current time
courses) at 0, 100, 300, and 1000 µM bupivacaine for the different channels
in Fig. 2A, using the
Kd(60) values listed in
Table 1. The resulting curves
of this global fit procedure are shown in
Fig. 2B. The values of
activation and blocking/unblocking rate constants (
,
, and
respectively) are given in the figure legend. The good fit between
the experimental data and the calculated curves suggest that the block can be
described by Scheme 1 type
kinetics. However, because the block of Kv2.1 did not display a peaked time
course, it was not possible to uniquely determine the blocking rate constants
but only minimum values. This means that, at this stage, we cannot exclude the
idea that other blocking mechanisms, comprising a state-independent component,
explain the experimental observations.
The cause of the nonpeaked time course in Kv2.1 channel might be the slow activation time (compared with the other Kv channels), masking a time-dependent blocking time course. We tried to clarify this issue by increasing the activation rate. There are two easy ways to experimentally accomplish this: to increase the temperature (compared with the previously used room temperature) and to increase the potential (compared with the previously used highest potential +60 mV). We used both ways. Figure 4 shows the results from an experiment, in which the temperature was increased from 24 to 32°C. The rate of activation increased 3-fold (mean t1/2 is decreased from 12 ± 1 to 4.0 ± 0.2 ms; n = 3) and a time dependence of the bupivacaine block (300 µM) at 32°C was clearly evident. Similar results were obtained in experiments with test steps up to +100 mV. The rate of activation was increased 45% (mean t1/2 is decreased from 12 ± 1 ms to 8.3 ± 0.6 ms; n = 5), and a time dependence of the block of 300 µM was visible (data not shown).
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Both types of experiments suggest that the block of Kv2.1 comprises an open-state dependent component. However, Scheme 1 was too simple to fully explain the block. We therefore extended it by assuming that the channel partially closes in bound state according to Scheme 2. When A was assumed to be 0.4, this scheme better explained the block of Kv2.1 channels than Scheme 1 where A = 0. However, it was difficult to obtain good estimations of the blocking time constant, and thus of the constant A, from the time course measurements because of poor experimental resolution (no pronounced peak). We therefore estimated A from the steady-state g(V) curves, which proved to be a more reliable method.
Steady-State Conductance Curve Analysis. We thus calculated steady
state g(V) curves for different bupivacaine concentrations
and fitted numerical solutions of Scheme
2 to the data. The voltage dependence of the activation and
blocking/unblocking transition was assumed to follow equations as described
under Materials and Methods (Eq. 4 and associated formulas). Fitting
Scheme 2 simultaneously to data
for 0, 100, 300, and 1000 µM yielded values of the activation rate
constants
and
, the blocking rate constants
and
, the constant A, and the electrical distance
.
The experimental results confirmed and extended the observations from
previous studies (Elinder et al.,
1996
) on the variability of activation range for the different
channels. The midpoints (V1/2) in control solution were
found to range from 29 mV (for Kv1.1) to +18 mV (for Kv3.1) and are
listed in Table 1. The results
also confirmed that the block of Kv2.1 deviated from that of the other
channels. For all the non-Kv2.1, the block could be described by
Scheme 2 with A = 0 (i.e.,
Scheme 1), whereas for Kv2.1, A
= 0.44 ± 0.06 (n = 4).
The difference between the block of Kv2.1 and of the other channels is illustrated in Fig. 5; A shows the effect of 300 µM bupivacaine on the g(V) curve of Kv1.5 and B shows the effect on the g(V) curve of Kv2.1 in comparison with solutions of Scheme 2, assuming A = 0 and A = 1. The experimental g(V) curve for Kv1.5 closely follows the curve predicted by A = 0 (no closure), whereas that for Kv2.1 is situated between the solutions for A = 0 and A = 1.
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In summary, the simulations and fitting procedures applied to the steady state g(V) curves show that the bupivacaine block of the Kv channels studied can all be explained by a simple open-statedependent mechanism, described by the unitary Scheme 2. What differs between the block of the different channels is the degree of closure at repolarization (i.e., the value of the constant A). Kv2.1 channels can partially close (A = 0.4), whereas Kv1 and -3 channels cannot (A = 0). The small electrical distances obtained suggest that the binding sites in all studied channels are located superficially (in electrical terms) on the internal side.
Tail Current Experiments Support the Partial Closure Hypothesis. The
g(V) curve analysis above of the bupivacaine effect on the
closing transition in bound state was supplemented by an analysis of the
effects on tail currents in high [K+] solutions. This approach
allows a direct estimation of the bupivacaine effect on the rate of the
backward transition (OB
CB) and thus of factor A.
Figure 6A shows tail currents
at 80 mV computed from Scheme
2 for the cases A = 0 and A = 0.4. The
difference between the crossing-over points of the test-control curves in the
two cases is clear. Figure 6, B and
C, shows the effect of 300 µM bupivacaine on the tail current
associated with a step from +60 to 80 mV in high [K+]
solutions for Kv2.1 and Kv1.2, as representative for the non-Kv2.1 channels. A
comparison between the experimental and the simulation curves suggests, in
agreement with the conclusions above, that the bupivacaine effect on Kv1.2 is
well explained by a nonclosure mechanism (A = 0) and that on Kv2.1 by
a partial closure mechanism (A = 0.4). This in turn strengthens the
view that bupivacaine affects the gating mechanisms in Kv2.1 and Kv1.2 (and
thus the non-Kv2.1 channels) in quantitatively different ways, suggesting
structural differences.
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The increased external [K+] in the tail experiments affected the
blocking kinetics of bupivacaine. Fitting
Scheme 2 to the experimental
curves for Kv2.1 and Kv1.2 gave
and
values that were,
compared with the values in Ringer test solutions, reduced by 3- to 5- and
2-fold, respectively, yielding a slight Kd increase (about
50%). The effect was, unexpectedly, voltage-independent, being equal at both
+60 and 80 mV, and thus independent of the current direction through
the pore. This suggests an interaction between external K+ and the
bupivacaine binding site, most likely by an allosteric mechanism (see
Discussion for the location of the binding site).
No Effect by Permanently Charged Local Anesthetics. In conclusion, the results suggest a single-site blocking mechanism for all channels studied. This conclusion was supported by results from experiments on Kv2.1 and Kv1.2 with permanently charged local anesthetic analogs, assumed to act exclusively from the external side. We used the bupivacaine analog LEA-113, the lidocaine analog LEA-120, and the mepivacaine analog RAD-250. They were applied in concentrations of up to 1000 µM for 10 min. No effect was observed for any analog on either of the two channels: LEA-113 was tested on six oocytes, RAD-250 on eight oocytes, and LEA-120 on four oocytes (data not shown).
Mutational Analysis
Substituting the S6 Helix Impairs Channel Closing in Bound State.
The S6 helix is expected to play a role for the binding of local anesthetics
(Ragsdale et al., 1994
;
Franqueza et al., 1997
). It is
also assumed to be directly involved in the gating process
(Yellen, 1998
;
Scholle et al., 2000
). There
are, therefore, at least two reasons to expect modifications of the
bupivacaine effect on Kv2.1 after a Kv1.2 S6 helix substitution: an indirect
effect caused by increased activation rate, causing a visible time-dependent
block, and a direct effect caused by structural modifications in the binding
region, decreasing the probability of closing the channel in bound state.
The effect of the S6 helix substitution per se is demonstrated in Fig. 7. The rate of activation is faster [t1/2(60) is 7.7 versus 12 ms; see Table 2] and the g(V) curve is strongly shifted to the left compared with that of the wild type (V1/2 shift is 36 mV; see Table 2). Compared with the donor channel (Kv1.2), however, the chimera does not activate as fast (t1/2 at +60 mV is 7.7 versus 3.7 ms), but it activates at more negative potentials (V1/2 shift is 14 mV).
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Thus, the effect of bupivacaine on the S6 substituted chimera ChS6 was, as expected, time dependent (Fig. 7A). This lends support to the conclusion that Kv2.1 comprises an open-statedependent site for bupivacaine, normally masked by a slow activation. Furthermore, analyzing the g(V) curve (Fig. 7B) by fitting Scheme 2 to the experimental data suggests that the channel probability of closing in bound state is very small in the S6 substituted chimera; i.e., its kinetics is explainable in terms of the scheme with A = 0. In summary, introducing the S6 helix of Kv1.2 into Kv2.1 induces Kv1.2 behavior with respect to bupivacaine action. The same conclusion is suggested by the change in the A value, reflecting the resistance to closing with bupivacaine bound at repolarization (0.03 versus 0.44; Table 1). The Kd value of the steady-state block at +60 mV is about 2-fold higher for ChS6 than that of wild-type Kv2.1 (520 versus 220 µM; Table 2).
N-terminal End Residues Are Critical for the Impaired Closing. To analyze the role of the specific residues in S6 important for the modified closing probability discussed above, we substituted smaller segments and single residues from Kv1.2 to Kv2.1 (Fig. 1). We used the channel constructs Mu395, Mu404, Mu409, and Mu417, which comprise substitutions of all the differing residues of the Kv2.1 and Kv1.2 S6 segments, for the experiments (see Materials and Methods). Except for Mu417, all the constructs showed a 2-fold increase in rate of activation compared with that of wild-type Kv2.1 (t1/2 = 5.16.6 ms versus 12 ms; Table 2). As mentioned above, the corresponding increase for the whole S6 substitution was also 2-fold (t1/2 = 7.7 ms; Table 2), suggesting a complex interaction between the residues involved in the activation process. Corresponding g(V) curves showed relatively small deviations (but in different directions) from that of the wild-type Kv2.1 [i.e., in contrast to the S6-substituted chimera (V1/2 shifts between +9 and 1 mV versus 36 mV; Table 2). In addition, the results here point to a complex, nonadditive interaction between the residues in determining the voltage dependence.
The effects of bupivacaine on the S6-modified channels are summarized in Table 2. A time-dependent block is evident at 1000 µM for all S6-modified channels (data not shown), supporting the hypothesis of an open-statedependent mechanism, explaining the bupivacaine effect on Kv2.1. The Kd values for the S6-modified channels varied between 170 and 420 µM.
Analyzing the g(V) curves by fitting Scheme 2 to the experimental data, we found that the bupivacaine effect on Mu395 was explainable in terms of the scheme with A = 0 (i.e., an open-state dependent mechanism with a very small probability to close with bupivacaine bound). In summary, introducing the 395 and 398 residues of Kv1.2 into Kv2.1 induces Kv1.2 behavior in Kv2.1 with respect to bupivacaine action. For Mu404, Mu409, and Mu417, the fitting procedures showed in all cases that A >0.4 (Table 2); i.e., they are explained by an open-statedependent mechanism similar to that of wild-type Kv2.1. Thus, they partially close with bupivacaine bound.
The effect of bupivacine on the closing transition is most easily investigated by analyzing the tail currents in high [K+] solutions. As shown above, the tail current in the case of no closure in bound state (i.e., A = 0) is predicted to clearly cross over the corresponding current in control solution, whereas in the case of normal closure with bupivacaine bound (i.e., A = 0.4), the crossing-over is much less conspicuous (see Fig. 6A).
Figure 8 shows the effect of 300 µM bupivacaine on the tail current associated with a step from 60 to 80 mV in high [K+] solutions for the chimeras Mu395, Mu404, and Mu409. In agreement with the conclusions above, a clear crossing-over is noted for Mu395, whereas the crossing-over for Mu404 and -409 is much less conspicuous.
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In summary, the results suggest that introducing Kv1.2 residues in the N-terminal end of the S6 helix above the assumed gating region (i.e., the S6 helices crossing point at the level of Ile409, Ile411, and Asn414) modifies the bupivacaine block of Kv2.1 indirectly as well as directly; indirectly by unmasking an open-state dependent mechanism through an increased rate of gating (residues Gly395, Cys398, Val404, Ile409, Ile411, and Asn414) and directly by modifying the gating process, reducing the probability of closing in bound state (G395 and C398). The affinity of the binding site, however, was not affected by any of these substitutions. This deviates from the effect of the C-terminal double mutation S417N/E418Y, which slightly increased the affinity (Table 2).
The results highlight the importance of the S6 helix for the activation of gating; except for Mu417, all S6 constructs studied increase the activation rate (Table 2). The g(V) curves are affected in a less homogenous way; a whole segment substitution causes a large negative shift whereas single residue substitutions cause relatively small shifts in both directions. As pointed out above, this implies that that the different residues interact in a complex way to open the activation gate.
Substituting the S5-S6 Linker Decreases the Affinity of Bupivacaine
Binding. Part of the internal vestibule wall is formed by the P-loop and
has been shown to be involved in the internal binding of TEA
(Yellen et al., 1991
). Thus,
substituting the whole linker S5-S6 can be expected to be involved in
bupivacaine binding. Furthermore, it is expected to give information on
possible external binding sites.
The result of the S5-S6 substitution per se was found to be an increased rate of activation (Table 2). The mean time to half-maximal current at +60 mV (t1/2) decreased from 12 to 7.9 ms. The g(V) curve was slightly shifted in positive direction (mean, +7 mV).
The effect of the substitution on the bupivacaine action is shown in Fig. 7A. It shows the result of applying three concentrations of bupivacaine on ChS5-S6 at +60 mV. The main result is that the block is reduced compared with that of both Kv1.2 and -2.1. The mean Kd of blocking ChS5-S6 at +60 mV is 1150 µM compared with 220 µM for Kv2.1 and 210 µM for Kv1.2 (Table 2). The A value, however, is relatively little changed compared with that of Kv2.1 (0.35 versus 0.44; see Table 2), suggesting that the S5-S6 linker is functionally associated with the binding transition but not with the closing transition (i.e., it does not determine factor A).
External Vestibule Residue Substitutions Do Not Contribute to the Whole Linker Effect. The lower affinity induced by the S5-S6 linker substitution was unexpected. To identify the critical residues, we performed segment and single-residue substitutions (Fig. 1). The role of the external vestibule residues was analyzed by substituting the S5-P and P-S6 segments separately (ChS5-P and ChP-S6) and in combination (ChS5-P/P-S6). The role of the P-region was analyzed in more detail by using the following three constructs: Mu366, characterized by the double substitution A366D/S367A, Mu372, characterized by the triple substitution T372V/I373V/T374S, and Mu383, characterized by the double substitution I383M/Y384V (see Fig. 1).
The effects of the substitutions per se on time course and g(V) curve are listed in Table 2. Effects ranged from negligible to increased rates of activation. Summarizing the results for the external vestibule residue substitutions, the increased rate of activation for the whole linker substitution is explained by residues in the P-S6 segment (mean t1/2 at +60 mV decreased from 12 to 7.2 ms). This may be related to the reported evidence for an S6 involvement in gating. The midpoint of the g(V) curve was only marginally affected. The affinity was considerably less affected by the external vestibule residues substitution than by the whole linker substitution (Table 2), confirming the conclusion from the results with permanently charged local anesthetics (see Materials and Methods) that no major block is exerted from binding to external residues. A slight time dependence of the block (i.e., the time course shows a peaked appearance) at 1000 µM was detected for the chimeras with increased rate of activation (ChS5-P/P-S6, ChP-S6), confirming the open-statedependent blocking mechanism.
The analysis of the g(V) curves confirms the results from the whole linker substitution; the S5-S6 linker is not functionally associated with the closing transition. This is reflected in the A values obtained [in the range 0.45 to 0.52 (Table 2)].
P-Loop Residues Are Critical for the Decreased Affinity. The P-loop residue substitutions resulted in more marked modifications of the block than the external residue substitutions. The effects of the substitutions per se are listed in Table 2. An increased rate of activation was noted for the substitutions in the N-terminal end of the P-loop (positions 366 and 367 in Kv2.1); the mean t1/2 at +60 mV was decreased from 12 to 7.2 ms. The shifts of the g(V) curves were small, the extremes being 2 and +5 mV.
The bupivacaine block was decreased by the triple-mutation T372V/I373V/T374S; the mean Kd value at +60 mV was increased to 1170 from 220 µM (Table 2). This suggests that the reduced affinity caused by the S5-S6 linker substitution is explained by modifications of the three-residue segment Thr372-Ile373-Thr374. In addition, the double mutation A366D/S367A decreased the affinity, but to a lesser extent (Kd being increased to 640 µM; Table 2). Analyzing the g(V) curves and determining the A value suggested that the P-loop substitutions did not affect the closing transitions markedly (Table 2).
As shown in the schematic channel structure of Fig. 1B, the three residues involved in the largest modification of bupivacaine block (positions Thr372, Ile373 and Thr374) are located in the descending helix of the P-loop. Based on the generally accepted assumption of a close homology between the pore domain of Kv2.1 and KcsA, we conclude that the discussed residues are not in contact with the external solution. The decrease in binding affinity of the S5-S6 linker substituted chimera therefore seems associated with modifications of the bupivacaine binding to the internal vestibule site.
| Discussion |
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Numerical simulations showed that the block could be described by a simple unitary state diagram (Scheme 2) in which the deviation of Kv2.1 is seen in the relatively high probability to pass into a bound closed state at depolarization. This means that in Kv2.1, the bupivacaine molecule is partly trapped in the internal vestibule of the channel at repolarization, whereas in the other channels, bupivacaine prevents the channel from closing.
This deviating feature of Kv2.1 is in line with the results from other
studies, suggesting Kv2.1 to be selectively sensitive to certain
pharmacological compounds, such as 4-aminopyridine and propafenone
(Kirsch et al., 1993
;
Madeja et al., 2003
).
Introducing Kv1.2 residues into positions 395 and 398 of Kv2.1 induced Kv1.2 features (i.e., decreased probability of closing), whereas substitutions of other S6 residues did not modify the bupivacaine block. Introducing Kv1.2 residues into positions 372, 373, and 374 of Kv2.1 decreased the bupivacaine affinity. The mutational effects on the Kv2.1 kinetics (Scheme 2) can be summarized as in Scheme 3.
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The Mu372 mutation leads to modified binding of bupivacaine (quantitatively described by a decreased affinity, Kd), and Mu395 to modified closing of the channel in bound state (quantitatively described by the trapping factor A).
The residues substituted in Mu372 and in Mu395 are most probably not
accessible for bupivacaine (but see
Pascual et al., 1995
). Both
groups of residues are also located near each other. Homology simulations, in
which Kv2.1 and chimeras were constructed on basis of the KcsA channel (see
Materials and Methods), suggest that the distances between them range
from 3.2 to 7.5 Å; the shortest distance is between S374 and C398 in the
Mu372 channel (see Fig. 1A). An
attractive idea is that the apparently different effects of these two groups
of mutations with reference to the blocking behavior are caused by a similar
mechanism. The following working hypothesis suggests such a unitary
mechanism.
We assume that bupivacaine in wild-type Kv2.1 is bound inside the internal vestibule and thereby blocks the K+ permeation through the channel. We also assume that bupivacaine has full access to its internal vestibule binding sites in open wild-type Kv2.1 channels. Mutation G395S/C398A is assumed to modify the open conformation (possibly by decreasing the entrance diameter, impairing the entrance of bupivacaine into the vestibule), causing bupivacaine to bind to a blocking site in the internal mouth region rather than to its site in the internal vestibule, thereby preventing channel closing. Mutation T372V/I373V/T374S is assumed to modify the open conformation even more (possibly by further decreasing the diameter), blocking the access of bupivacaine to any blocking site.
Related Findings in Other Studies. Binding of local anesthetics to
an open-state dependent site in an internal vestibule was postulated early
(Hille, 1977
), as was the
binding of other channel blocking compounds
(Armstrong, 1971
;
Kristbjarnarson and Århem,
1982
). Molecular studies later confirmed these early suggestions
(Ragsdale et al., 1994
;
Yellen et al., 1991
;
Choi et al., 1993
;
Kirsch et al., 1993
; for
another view, see del Camino et al.,
2000
), most recently by using crystallographic methods
(Zhou et al., 2001
;
Jiang et al., 2002
).
The fact that point mutations in the N-terminal end of S6 (Mu395) modify
the blocking kinetics so drastically (from trapping to nontrapping) is
remarkable, in view of the distance between the substituted residues (395 and
398) and the assumed gating region, the S6 bundle crossing. However, some
recent findings may make our working hypothesis less far-fetched. One is that
a more closely located glycine (G401) may be the critical hinge for the gating
mechanism (Jiang et al., 2002
;
Yifrach and MacKinnon, 2002
).
Another is that the I470C mutation in Shaker (corresponding to I405 in Kv2.1)
induces trapping of TEA and C10
(Holmgren et al., 1997
). Yet
another finding is that V373 in Kv2.1 affects the TEA binding, possibly
without being part of the binding site
(Kirsch et al., 1992
).
Physical Nature of the Bupivacaine Binding. The exact location and
the physical nature of the site(s) and bond(s) between channel and bupivacaine
are unknown. The S6 segment has been reported to form part of the binding
site/sites of local anesthetics (Ragsdale
et al., 1994
), of longer quaternary ammonium ions
(Choi et al., 1993
) and of
4-aminopyridine (Kirsch et al.,
1993
), whereas the P-loop has been reported to be involved in
tetraethyl ammonium binding (Yellen et
al., 1991
; Choi et al.,
1993
). The residues of the S6 segment reported to be critical for
local anesthetic binding in Na+ channels are aromatic
(Ragsdale et al., 1994
).
Likewise, the residues critical for antiarrhythmic binding in HERG channels
have been reported to be aromatic
(Mitcheson et al., 2000
). Both
studies suggest that local anesthetics and antiarrhythmic drugs form
ion-dipole and dipole-dipole
bonds with the channel. As seen in
Fig. 1, no aromatic residues
are present in the S6 segment of the channels studied, excluding the
possibility of forming ion-dipole
bonds and reducing the possibility of
forming dipole-dipole
bonds for the bupivacaine molecule in the internal
vestibule. Thus, we have to search for other types of interactions between
bupivacaine and the K+ channels studied. Thermodynamic
considerations of our data on Kv2.1 suggest that they are hydrophobic. The
temperature experiments allow us to calculate the binding energy (as enthalpy
H) from the van't Hoff relation
![]() | (6) |
H value of 20.8 kJ/mol, which is within the range of
hydrophobic bond energies encountered in biological processes
(Freifelder, 1985
S is calculated from the equation
![]() | (7) |
S is the entropy change and
G is the
Gibb's energy, given by
![]() | (8) |
S value would be even higher. This would further
strengthen the hydrophobic bond hypothesis (see also
Dickinson et al., 1993
|
Most substitutions in the present investigation concern residues not directly constituting a part of the internal vestibule wall. Only residues 404 and 409 point in the direction of the cavity center. Substitutions of these residues, however, affected neither the bupivacaine binding nor the closing transition of the bupivacaine-bound channel, despite changes in hydrophobicity and size (Table 4). Thus, we suggest that bupivacaine mainly forms hydrophobic bonds with internal vestibule residues, not modified in the present investigation.
|
Concluding Remark. The fact that only Kv2.1 traps the bupivacaine molecule is remarkable, considering the close structural relationship within the Kv family. Even more remarkable is the fact that this ability can be related to one/two amino acids, as is also the fact that the bupivacaine affinity can be drastically reduced by substitutions of a few residues that do not constitute a part of the binding site. Similar differences concerning pharmacological action are likely to be found within the same subtype when comparing different species. This highlights the importance of investigating relevant channel subtypes when analyzing pharmacological effects, especially when extending a pharmacological study of an animal system to humans.
| Appendix |
|---|
|
|
|---|
Fitting this scheme to the experimental data in Fig. 5A gave a dissociation constant (at 0 mV) for the open-statedependent binding (Kd1) of 620 µM and one for the state-independent binding (Kd2)of710 µM. The mean values of Kd1 and Kd2 were 530 ± 80 and 660 ± 70 µM, respectively.
However, this scheme could not be used to successfully describe the temperature effect. Using the blocking rate constants obtained from fitting Scheme 4 to the experimental curves at 24°C, it was not possible to predict the experimental time course at 32°C (which showed, for instance, no peak at +60 mV). Similarly, it was not possible to use Scheme 4 to explain the experimental time courses at +100 mV. Together with the finding that Kv2.1 does not have external binding sites, these facts make Scheme 4 unlikely as an explanation of the bupivacaine effect on Kv2.1.
| Acknowledgements |
|---|
| Footnotes |
|---|
ABBREVIATIONS: TEA, tetraethylammonium.
Address correspondence to: Peter Århem, The Nobel Institute for Neurophysiology, Department of Neuroscience, Karolinska Institutet, SE-171 77 Stockholm, Sweden. E-mail: peter.arhem{at}neuro.ki.se
| References |
|---|
|
|
|---|
Åqvist J and Luzhkov V (2000) Ion permeation mechanism of the potassium channel. Nature (Lond) 404: 8818844.[CrossRef][Medline]
Armstrong CM (1971) Inactivation of tetraethylammonium
ion derivatives with the potassium channels of giant axons. J Gen
Physiol 58:
413437.
Butterworth IVJF and Strichartz GR (1990) Molecular mechanisms of local anesthesia: a review. Anesthesiology 4: 711734.
del Camino D, Holmgren M, Liu Y, and Yellen G (2000) Blocker protection in the pore of a voltage-gated K+ channel and its structural implications. Nature (Lond) 404: 321325.[Medline]
Cantor CR and Schimmel PR (1980) The conformation of biological macromolecules, in Biophysical Chemistry, Part 1, pp 287288, WH Freeman and Company, San Francisco.
Choi KL, Mossman C, Aube J, and Yellen G (1993) The internal quaternary ammonium receptor site of Shaker potassium channels. Neuron 10: 533541.[CrossRef][Medline]
Dickinson R, Franks NP, and Lieb WR (1993) Thermodynamics of anesthetic/protein interactions. Temperature studies on firefly luciferase. Biophys J 64: 12641271.[Medline]
Doyle DA, Cabral JM, Pfuetzner RA, Kuo A, Gulbis JM, Cohen SL,
Chait BT, and MacKinnon R (1998) The structure of the potassium
channel: molecular basis of K+ conduction and selectivity.
Science (Wash DC) 280:
6977.
Elinder F, Madeja M, and Arhem P (1996) Surface
Charges of K channels. Effects of strontium on five cloned channels expressed
in Xenopus oocytes. J Gen Physiol
108:
325332.
Finkel AS and Gage PW (1985) Conventional voltage clamping with two intracellular microelectrodes, in Voltage and Patch Clamping with Microelectrodes (Smith T Jr, et al., eds), pp 4793, American Physiological Society, Baltimore.
Franqueza L, Longobardo M, Vicente J, Delpon E, Tamkun MM, Tamargo
J, Snyders DJ, and Valenzuela C (1997) Molecular determinants of
stereoselective bupivacaine block of hKv1.5 channels. Circ
Res 81:
10531064.
Freifelder D (1985) Principles of Physical Chemistry with Applications to the Biological Sciences. 2nd ed. Jones and Bartlett, Boston.
Harris T, Shahidullah M, Ellingson JS, and Covarrubias M
(2000) General anesthetic action at an internal protein site
involving the S4S5 cytoplasmic loop of a neuronal K+
channel. J Biol Chem
275:
49284936.
Hille B (1977) Local anesthetics: hydrophilic and
hydrophobic pathways for the drug-receptor reaction. J Gen
Physiol 69:
497575.
Hille B (2001) Ionic Channels of Excitable Membranes. Sinauer Associates, Inc, Sunderland, MA.
Holmgren M, Smith PL, and Yellen G (1997) Trapping of
organic blockers by closing of voltage-dependent K+ channels:
evidence for a trap door mechanism of activation gating. J Gen
Physiol 109:
527535.
Hondeghem LM and Katzung BC (1977) Time and voltage dependent interactions of antiarrhythmic drugs with cardiac sodium channels. Biochim Biophys Acta 472: 373398.[Medline]
Jiang Y, Lee A, Chen J, Cadene M, Chait BT, and MacKinnon R (2002) The open pore conformation of potassium channels. Nature (Lond) 417: 523526.[CrossRef][Medline]
Kirsch GE, Drewe JA, Hartmann HA, Taglialatela M, de Biasi M, Brown AM, and Joho RH (1992) Differences between the deep pores of K+ channels determined by an interacting pair of nonpolar amino acids. Neuron 8: 499505.[CrossRef][Medline]
Kirsch GE, Shieh CC, Drewe JA, Vener DF, and Brown AM (1993) Segmental exchanges define 4-amonopyridine binding and the inner mouth of K+ pores. Neuron 11: 503512.[CrossRef][Medline]
Kristbjarnarson H and Århem P (1982) The effect of crown ethers on ionic currents in myelinated nerve fibres from Xenopus laevis. Acta Physiol Scand 123: 261268.[CrossRef]
Kyte J and Doolittle RF (1982) A simple method for displaying the hydrophobic character of a protein. J Membr Biol 157: 105132.
Lipka LJ, Jiang M, and Tseng G (1998) Differential effects of bupivacaine on cardiac K channels: role of channel inactivation and subunit composition in drug channel interaction. J Cardiovasc Electrophysiol 9: 727742.[Medline]
Longobardo M, Gonzalez T, Navarro-Polanco R, Caballero R, Delpon E, Tamargo J, Snyders DJ, Tamkun MM, and Valenzuela C (2000) Effects of a quaternary bupivacaine derivative on delayed rectifier K+ currents. Br J Pharmacol 130: 391401.[CrossRef][Medline]
Madeja M, Musshoff U, and Speckmann EJ (1991) A concentration-clamp system allowing two-electrode voltage-clamp investigations in oocytes of Xenopus laevis. J Neurosci Methods 38: 267269.[CrossRef][Medline]
Madeja M, Leicher T, Friederich P, Punte MA, Haverkamp W, Musshoff
U, Breithardt G, and Speckmann EJ (2003) Molecular site of action
of the antiarrhythmic drug propafenone at the voltage-operated potassium
channel Kv2.1. Mol Pharmacol
63:
110.
Mather LE and Chang DH (2001) Cardiotoxicity with modern local anaesthetics: is there a safer choice? Drugs 61: 333342.[CrossRef][Medline]
Mitcheson JS, Chen J, Lin M, Culberson C, and Sanguinetti MC
(2000) A structural basis for drug-induced long QT syndrome.
Proc Natl Acad Sci USA
97:
1232912333.
Pascual JM, Shieh CC, Kirsch GE, and Brown AM (1995) K+ pore structure revealed by reporter cysteines at inner and outer surfaces. Neuron 14: 10551063.[CrossRef][Medline]
Ragsdale DS, McPhee JC, Scheuer T, and Catterall WA
(1994) Molecular determinants of state-dependent block of
Na+ channels by local anesthetics. Science (Wash
DC) 265:
17241728.
Scholle A, Koopmann T, Ludwig J, Pongs O, and Benndorf K (2000) Structural elements determining activation kinetics in Kv2.1. Recept Channels 7: 6575.[Medline]
Stühmer W, Stocker M, Sakman B, Seeburg P, Baumann A, Grupe A, and Pongs O (1988) Potassium channels expressed from rat brain cDNA have delayed rectifier properties. FEBS Lett 242: 199206.[CrossRef][Medline]
Valenzuela C, Delpon E, Tamkun MM, Tamargo J, and Snyders DJ (1995) Stereoselective block of a human cardiac potassium channel (Kv1.5) by bupivacaine enantiomers. Biophys J 69: 418427.[Medline]
Yellen G (1998) The moving parts of voltage-gated ion channels. Q Rev Biophys 31: 239395.[CrossRef][Medline]
Yellen G, Jurman ME, Abramson T, and MacKinnon R
(1991) Mutations affecting internal TEA blockade identify the
probable pore-forming region of a K+ channel. Science
(Wash DC) 251:
939942.
Yifrach O and MacKinnon R (2002) Energetics of pore opening in a voltage-gated K+ channel. Cell 111: 231239.[CrossRef][Medline]
Zamyatnin AA (1972) Protein volume in solution. Prog Biophys Mol Biol 24: 107123.[CrossRef][Medline]
Zhou M, Morais-Cabral JH, Mann S, and MacKinnon R (2001) Potassium channel receptor site for the inactivation gate and quaternary amine inhibitors. Nature (Lond) 411: 657661.[CrossRef][Medline]
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