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Section of Experimental Chemotherapy, Department of Medical Oncology, Erasmus University Medical Center Rotterdam, Josephine Nefkens Institute, Rotterdam, the Netherlands (P.W.S., M.B., A.W.M.B., H.B., G.S., K.N.); and Medical Genetics Centre South-West Netherlands, Department of Molecular Genetics, Leiden Institute of Chemistry, Gorlaeus Laboratories, Leiden University, Leiden, the Netherlands (J.A.B., H.D.D., J.B.)
Received November 20, 2002; accepted May 9, 2003
| Abstract |
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cells (i.e.,
cells from which the NPR2 gene had been disrupted) to the anticancer
drug doxorubicin, in combination with hypersensitivity to cadmium chloride.
Furthermore, npr2
cells displayed unaltered cellular cisplatin
and doxorubicin accumulation and showed an enhanced rate of spontaneous
mutation compared with the isogenic parent. These data indicate that the
npr2
phenotype overlaps that of the sky1
cells
that we characterized previously (Mol Pharmacol
61:659666, 2002). Therefore, we generated yeast
npr2
sky1
double-knockout cells and performed
clonogenic survival assays for cisplatin and doxorubicin, which revealed that
NPR2 and SKY1 (SR-protein-specific kinase from budding
yeast) are epistatic. The double-knockout strain was just as resistant to
cisplatin and doxorubicin as the single-knockout strain that was most
resistant to either drug. In conclusion, we identified NPR2 as a
novel component involved in cell kill provoked by cisplatin and doxorubicin,
and our data support the hypothesis that NPR2 and SKY1 may
use mutual regulatory routes to mediate the cytotoxicity of these anticancer
drugs.
We are using the budding yeast Saccharomyces cerevisiae as a model
system for drug sensitivity and resistance in higher eukaryotes. Over the
years, yeast has proven its value as an accessible tool to gain a better
understanding of complicated and often integrated mechanisms such as
recombination, DNA repair, and checkpoint control in mammalian cells. Human
genetic defects can regularly be addressed directly in yeast because of the
evolutionary conservation of genes and signal transduction pathways
(Resnick and Cox, 2000
). With
regard to the cellular response to anticancer agents, there are many fine
examples that illustrate the power of yeast as a model organism for mammalian
cells. To mention a few, the Saccharomyces cerevisiae pleiotropic
drug resistance network comprises homologs to the human ATP-binding
cassette-type transporters P-glycoprotein and MRP and is an important
laboratory model for the clinical problem of multidrug resistance
(Kolaczowska and Goffeau,
1999
). The yeast nucleotide excision repair (NER) system has been
instrumental in the study of NER in mammalian cells
(Prakash and Prakash, 2000
;
Resnick and Cox, 2000
). It has
long been known that S. cerevisiae NER mutants are hypersensitive to
cisplatin (Abe et al., 1994
).
In line with this, the involvement of NER in cisplatin resistance in
patient-derived material has been observed repeatedly
(Crul et al., 1997
), whereas
decreased NER may contribute to the high cisplatin sensitivity of testis
tumors (Köberle et al.,
1999
). The predictive value of yeast in the study of cellular drug
resistance in humans is also illustrated by our own research. In previous
studies (Schenk et al., 2001
;
Schenk et al., 2002
), we
identified SKY1 (SR-protein-specific kinase from budding yeast) as a
cisplatin sensitivity gene. Its abrogation conferred cisplatin resistance in
yeast, and down-regulation of its human homolog SRPK1 (SR-protein-specific
kinase) led to cisplatin resistance in an ovarian carcinoma cell line
(Schenk et al., 2001
).
Importantly, we recently monitored SRPK1 protein expression in a series of
testicular germ cell tumors, and found that the expression in tumors from
chemorefractory patients was significantly lower than in tumors from patients
responding to platinum-based chemotherapy (P. W. Schenk H. Stoop, F. Mayer, C.
Bokemeyer, G. Stoter, J. W. Oosterhuis, L. H. J. Looijenga, and K. Nooter,
manuscript in
preparation1). This
indicates that the identification of SKY1 as a cisplatin sensitivity
gene in S. cerevisiae may ultimately be of importance to predict the
chemoresponsiveness of particular tumors in the clinic.
Our present data indicate that NPR2 (nitrogen permease regulator
2) is a novel yeast drug sensitivity gene whose abrogation leads to resistance
not only to cisplatin but also to another anticancer agent, doxorubicin. The
overall phenotype that we show for S. cerevisiae npr2
cells
(i.e., cells from which the NPR2 gene had been disrupted) is highly
reminiscent of our previous data for sky1
cells
(Schenk et al., 2002
).
Therefore, we generated npr2
sky1
double-knockout cells and found that NPR2 and SKY1 are
epistatic. The cisplatin and doxorubicin resistance of the double-knockout
cells was neither additive nor synergistic compared with the single-knockout
cells, suggesting that NPR2 may act in mutual regulatory routes with
SKY1.
| Materials and Methods |
|---|
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Yeast Strains and Culture Conditions. S. cerevisiae strains
used in this study are listed in Table
1. All yeast strains were routinely maintained on selective
synthetic YNB medium [0.67% YNB and 2% D-(+)-glucose]. Where
appropriate, media were solidified by the addition of 2% Bacto-agar and
supplemented with amino acids depending on the auxotrophic requirements.
S. cerevisiae was grown at 30°C under vigorous shaking for liquid
cultures. Escherichia coli strains MC1061 and DH5
were used as
bacterial hosts for plasmids.
|
Yeast Random Transposon Insertion Library, Screening Strategy, and
Characterization of Cisplatin-Resistant Strains. A yeast genomic
mini-Tn3::lacZ::LEU2 transposon insertion library
(a kind gift from Dr. P. B. Ross-Macdonald)
(Burns et al., 1994
) was
amplified in E. coli strain MC1061 and transformed into
leucine-deficient yeast cells to randomly disrupt genes in the S.
cerevisiae genome as described previously
(Schenk et al., 2001
).
Homologous recombination between yeast DNA transposon flanking sequences and
endogenous genomic sequences is thought to yield transformants in which the
original genomic copy has been replaced by the mutagenized version
(Rothstein, 1991
).
NER-deficient rad4
yeast strain MGSC131
(Verhage et al., 1996
) was
used as recipient, because it displays a steep dose-response curve to
cisplatin. A total of 3 x 105 leucine-proficient S.
cerevisiae MGSC131 transformants were replated at a density of
104 cells per 94-mm dish on selective YNB containing 4 µg/ml
cisplatin, and colonies surviving this one-step drug selection were picked and
retested in semiquantitative spot assays and quantitative clonogenic survival
assays as described previously (Schenk et
al., 2001
). Upon confirmation of resistance phenotypes, the number
of transposons per yeast strain was determined by Southern blotting. For the
strains containing single insertions, inverse PCR
(Ochman et al., 1988
)
employing BstYI and outward-directed primers complementary to
mini-Tn3::lacZ::LEU2 was directly used to obtain
sequences flanking the transposon elements. Suitable PCR products were
purified and sequenced using transposon-specific primers, and sequences were
finally analyzed employing public databases
(Schenk et al., 2001
).
Plasmid Construction and Transformation. The low-copy yeast
expression vector pYCTEF111 containing the LEU2 auxotrophic marker
was obtained by ligating the 5.8-kb PvuII backbone fragment from
centromeric plasmid YCplac111 (Gietz and
Sugino, 1988
) to the 1.0-kb PvuII fragment from pYCTEF
(Schenk et al., 2001
),
containing the constitutive translation elongation factor 1
promoter. A
1.9-kb NPR2 PCR product was obtained employing primers 5'NPR2-S
(5'-GAC TAG CCC GGG CTC TAC TAA AGG GAA TGG TCA G-3') and
3'NPR2-S (5'-GAC TTG AGT CGA CGA ATT TCT CTA ATT TTA ACT CAG
C-3'). This fragment was restricted with SmaI and SalI
and cloned into SmaI/SalI-digested pYCTEF111, yielding
pYCTEF111-NPR2. After propagation in E. coli subcloning
efficiency DH5
competent cells (Invitrogen, Breda, The Netherlands),
the NPR2 expression plasmid and the empty vector were transformed
into the appropriate yeast strains.
Cytotoxicity Assays. Sensitivity to cytotoxic chemicals was
determined by a semiquantitative spot assay as described previously
(Burger et al., 2000
). Briefly,
S. cerevisiae cells from freshly streaked plates were inoculated and
grown to mid-log phase in selective liquid YNB medium. Different aliquots of
cells (as indicated in the figure legends) were then spotted onto selective
YNB plates containing various compound concentrations and incubated at
30°C for 3 to 4 days. Sensitivity to ionizing radiation was tested by a
similar assay, during which spotting of the yeast cells was immediately
followed by irradiation with increasing doses of
-rays using opposing
137Cs sources (Gamma Cell 40; Atomic Energy of Canada, Ottawa,
Canada) at a rate of 1.06 to 1.08 Gy/min. Sensitivity to ultraviolet light was
also tested by a semiquantitative spot assay as described previously
(Burger et al., 2000
), using a
germicidal lamp at 254 nm. Sensitivity to cisplatin and doxorubicin was
analyzed in detail by a quantitative clonogenic survival assay. Serial
dilutions of mid-log phase yeast cells were plated onto selective YNB
containing various drug concentrations. Plates were incubated at 30°C for
3 to 4 days, colonies were counted, and percentage survival was calculated
based on the number of colonies arising in the absence of cytotoxic agents
(Burger et al., 2000
;
Schenk et al., 2002
). Where
appropriate, the slopes of the log-linear concentration-survival curves were
determined by linear regression analysis using SPSS 10.1 (SPSS Inc., Chicago,
IL).
Determination of Cellular Platinum and Doxorubicin Accumulation.
Cellular platinum content was determined by atomic absorption spectrometry
(AAS) using a flameless spectrometer (type 4110 ZL; PerkinElmer Analytical
Instruments, Shelton, CT) as described previously
(Burger et al., 2000
). A total
of 2 x 107 exponentially growing yeast cells were incubated
in 5 ml of selective liquid YNB medium containing various cisplatin
concentrations for 18 h. After drug exposure, cells were immediately washed
three times, and 3 x 107 cells were pelleted and completely
lysed in 100 µl of chloroform. After evaporation of residual chloroform,
samples were dissolved in 0.2% nitric acid and subjected to AAS to determine
total platinum content. Cellular doxorubicin content was measured by
high-performance liquid chromatography (HPLC) as described previously
(de Bruijn et al., 1999
). A
total of 8 x 106 exponentially growing yeast cells were
incubated in 2 ml of selective liquid YNB medium per Vacutainer tube with
Hemogard closure (BD Clinical Laboratory Solutions, Franklin Lakes, NJ)
containing various doxorubicin concentrations for 18 h. After drug exposure,
cells were immediately washed three times in ice-cold medium, and 1.5 x
107 cells were pelleted and dissolved in drug-free human plasma.
Samples were finally subjected to pretreatment and HPLC as described
previously (de Bruijn et al.,
1999
) to determine total doxorubicin content.
Determination of Mutation Rates. The frequency of spontaneous
mutations was assessed by a forward mutation rate assay that detects genetic
alterations inactivating the arginine permease gene
(Tishkoff et al., 1997
) [i.e.,
conversion of the CAN1+ to the can1 (canavanine
resistance) mutant phenotype]. A total of 11 parallel cultures per strain were
inoculated at low density from freshly streaked plates and grown to stationary
phase in liquid YPD broth at 30°C. The viable titers and numbers of
canavanine-resistant mutants were then determined by plating different
aliquots on YPD broth and synthetic medium containing 40 µg/ml canavanine
sulfate, respectively. Mutation rates were finally calculated from the
resulting median mutant frequencies by iteration according to Drake
(1991
).
Generation of npr2
sky1
Cells. A SKY1 disruption was generated in npr2
and BY4742 cells using a sky1
::lox-URA3-lox
geneblaster (i.e., a 5' SKY1
flank-lox-URA3-lox-3' SKY1 flank
fragment). First, the flanking sequences of the SKY1 gene were
amplified separately from yeast genomic DNA by PCR, employing primers dis1
(5'-CCG AAG CCA TTG TAG GGG AG-3') and dis2 (5'-CAT GGT
GAC CAA TTA TTT CTC AGC GCC AGG TG-3') for the 5'-flank and
dis3 (5'-CAT GGT TAC CTT TAT TTT GCC CTT GCC TTT T-3') and
dis4 (5'-GCC ACA ACG GTC GCA AAG TC-3') for the 3'-flank.
BstEII-specific bases are indicated in bold. The resulting products,
containing different BstEII sites, were then digested with
BstEII and ligated to a 1.3-kb BstEII fragment containing a
URA3 cassette flanked by loxP sequences
(Jansen et al., 2002
).
Finally, the entire geneblaster was amplified by PCR using primers dis1 and
dis4 and transformed into S. cerevisiae npr2
and BY4742 cells
to obtain npr2
sky1
and
BY-sky1
cells, respectively. In the resulting yeast cells,
SKY1 sequences were deleted from -72 to + 2242 relative to the
2229-bp open reading frame. Disruptions of NPR2 and/or the
SKY1 gene in npr2
, npr2
sky1
, and BY-sky1
cells were checked by
PCR.
| Results |
|---|
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In one of the remaining library-derived strains, the single transposon
insertion was located between the YEL063C and the YEL062W locus corresponding
to the CAN1 and the NPR2 gene, respectively. In this region,
CAN1 and NPR2 have a common 5'-untranscribed sequence
that may represent a shared functional regulatory segment
(Rousselet et al., 1995
).
Because the original MGSC131 strain carries a can1-100
mutation (Verhage et al.,
1996
), it seems very unlikely that the cisplatin resistance in the
transposon containing strain would have resulted from deregulation of
CAN1 instead of the NPR2 gene. The Npr2p gene product is
thought to be a regulatory protein for nitrogen permeases, which may act at
both the transcriptional and post-transcriptional levels
(Rousselet et al., 1995
). We
tested the transposon-derived mutant in a clonogenic survival assay
(Fig. 1A) and found that it was
2-fold cisplatin-resistant compared with untransformed parental MGSC131
cells.
|
Characterization of Independent Mutant Cells. To exclude that the
observed cisplatin-resistant phenotype of the transposon containing yeast
strain might have arisen from unrelated mutations induced during the screening
procedure (i.e., cisplatin-induced mutations instead of library-derived
NPR2 disruption leading to resistance) or that NER deficiency might
be involved, we obtained an independent disruption mutant. S. cerevisiae
npr2
cells were made by disruption of the NPR2 gene in
the repair-proficient RAD+ strain BY4742, which also
contains an intact CAN1/NPR2 untranscribed regulatory
segment and CAN1 coding region
(Table 1). Analogous to the
original transposon-containing strain, npr2
cells were also
cisplatin-resistant compared with isogenic BY4742 cells
(Fig. 1B). In addition, we
tested independent BUH3 npr2 cells that had been generated in a
different repair-proficient, CAN1+ background
(Table 1). These npr2
mutant cells (Rousselet et al.,
1995
) were also cisplatin-resistant compared with their isogenic
parent CMY375, with a similar level of resistance
(Fig. 1C). The data thus
clearly indicate that the observed cisplatin resistance was linked to
disruption of the S. cerevisiae NPR2 gene, without requirement for
NER deficiency or deregulation of the CAN1 gene.
Cross-Resistance of Yeast Cells Containing a Disrupted NPR2
Gene. To learn more about the mechanisms that may underlie the cisplatin
resistance phenotype and to determine its specificity, we monitored
npr2
mutants for cross-resistance to other cytotoxic agents.
Semiquantitative spot assays were performed using a range of different classes
of chemicals (mostly anticancer drugs), including the cisplatin analog
oxaliplatin, heavy metals (cadmium chloride, zinc chloride, and copper
sulfate), the methylating agent
N-methyl-N'-nitro-N-nitrosoguanidine (MNNG),
the antimetabolite 5-fluorouracil, and topoisomerase II inhibitors
(doxorubicin and etoposide). In addition, we assessed possible
cross-resistance to ionizing radiation and ultraviolet light. Interestingly,
disruption of NPR2 conferred resistance not only to cisplatin but
also to the anthracycline doxorubicin
(Table 2;
Fig. 2), with a level of
resistance in the 4-fold range. However, sensitivity toward the cisplatin
analog oxaliplatin and another topoisomerase II inhibitor, etoposide, was
unaltered. Moreover, we did not observe changes in sensitivity to zinc
chloride, copper sulfate, MNNG, 5-fluorouracil, ionizing radiation, or
ultraviolet light either. Notably, npr2
mutants were
hypersensitive toward cadmium chloride. In
Fig. 2, representative examples
of the spot assays performed are shown.
|
|
Complementation of Yeast npr2
Cells with an
Expression Plasmid Harboring NPR2. To further confirm that NPR2
is involved in the cytotoxicity induced by anticancer agents, its coding
region was cloned into the low-copy S. cerevisiae expression vector
pYCTEF111. The resulting plasmid was transformed into npr2
cells, and the cisplatin and doxorubicin sensitivity of the transformed strain
was determined versus the appropriate controls. Upon transformation of plasmid
pYCTEF111-NPR2 (harboring NPR2 under the constitutive
translation elongation factor 1
promoter) into npr2
cells, the cisplatin- and doxorubicin-resistant phenotype was fully
complemented. The cells became as sensitive to cisplatin
(Fig. 3A) and doxorubicin
(Fig. 3B) as strain BY4742
transformed with the empty vector, whereas transformation with pYCTEF111 alone
left the npr2
cells clearly drug-resistant. These data affirm
that the observed cisplatin and doxorubicin resistance was linked to
disruption of the NPR2 gene, and indicate that the corresponding gene
product may be actively involved in the cytotoxicity of these drugs (i.e.,
that NPR2 is a cisplatin and doxorubicin sensitivity gene).
|
Cisplatin and Doxorubicin Sensitivity of Yeast Cells Containing a
Disrupted DUR3 Gene. The most likely downstream target of
NPR2 is the S. cerevisiae DUR3 gene, encoding a putative
transmembrane component required for active transport of urea
(ElBerry et al., 1993
).
Rousselet et al. (1995
) showed
that the level of DUR3 mRNA in BUH3 npr2 cells is strongly
increased, indicating that NPR2 might code for a transcriptional
regulator of DUR3 (see Discussion). Furthermore, several
lines of evidence suggest that the Npr2p protein is also involved in the
regulation of the nitrogen permease Dur3p at the post-transcriptional level
(Rousselet et al., 1995
).
Therefore, we initially hypothesized that NPR2 might mediate
cisplatin- and doxorubicin-induced cell kill through a DUR3-dependent
pathway. To assess the possible role of DUR3 in anticancer drug
resistance, we obtained dur3
disruption mutant cells derived
from strain BY4742 (Table 1)
and determined their sensitivity to cisplatin and doxorubicin. In contrast to
npr2
cells, dur3
cells did not show altered
drug sensitivities, compared with their isogenic parent
(Fig. 4). This finding implies
that DUR3 is not involved in the cytotoxic action of cisplatin or
doxorubicin.
|
Platinum and Doxorubicin Accumulation in npr2
Mutants. To determine whether the resistant phenotype of
npr2
cells might be linked to impaired drug accumulation, we
monitored cellular platinum and doxorubicin content by AAS
(Burger et al., 2000
) and HPLC
(de Bruijn et al., 1999
),
respectively. For both agents, we found a clear dose-effect relationship
between drug exposure and cellular accumulation. However, S. cerevisiae
npr2
cells did not display reduced platinum or doxorubicin
accumulation compared with isogenic NPR2+ cells
(Fig. 5). Therefore, the
observed cisplatin and doxorubicin resistance can probably not be explained by
decreased drug import or increased drug export.
|
Yeast npr2
Cells Display a Mutator Phenotype.
Interestingly, the pattern of drug resistance and hypersensitivity that we
found for S. cerevisiae npr2
cells is highly reminiscent of
our previous data for sky1
cells
(Schenk et al., 2002
).
Sky1
cells also displayed cross-resistance to cisplatin (but
not oxaliplatin) and doxorubicin, in combination with hypersensitivity to
cadmium chloride. In addition, the cisplatin- and doxorubicin-resistant
phenotype of sky1
cells was not linked to impaired drug
accumulation either. NPR2 and SKY1 might thus be involved in
common cellular pathways. As demonstrated before
(Schenk et al., 2002
),
sky1
cells also showed a mutator phenotype (i.e., a 2.4-fold
enhanced rate of spontaneous mutation compared with their isogenic parent). To
further explore a possible relationship between NPR2-and
SKY1-dependent cellular processes, we determined whether
npr2
cells also display this phenotype. The rate of forward
mutation at the CAN1 locus was thus assessed for npr2
cells and isogenic BY4742 NPR2+ cells. There was a 2-fold
increase of the mutation rate per replication in the npr2
strain (rate, 4.8 x 10-8) versus the
NPR2+ strain (rate, 2.5 x
10-8), as shown in
Fig. 6. These data indicate
that, like disruption of the SKY1 gene, loss of NPR2 induces
a mutator phenotype.
|
Cisplatin and Doxorubicin Resistance of npr2
sky1
Cells. To further explore whether
NPR2 and SKY1 might play a role in common pathways, we
generated a SKY1 disruption in npr2
and BY4742
parental cells, to obtain an npr2
sky1
double-knockout strain and its isogenic control BY-sky1
,
respectively. To determine whether NPR2 and SKY1 are
epistatic, we tested the npr2
sky1
cells for
their sensitivity toward cisplatin and doxorubicin. Because the double
knockout strain showed diminished growth in the absence of cytotoxic agents,
we assessed its possible drug resistance in semiquantitative spot assays
(Fig. 7, A and B) as well as in
quantitative clonogenic assays (Fig. 7, C
and D). From our experiments, it is clear that neither the
cisplatin nor the doxorubicin resistance displayed by the npr2
sky1
cells was additive or synergistic, compared with the
single-knockout strains. We conclude that the double-knockout cells were as
resistant to cisplatin as the single-knockout cell that was most resistant to
this drug (i.e., strain BY-sky1
)
(Fig. 7, A and C) and as
resistant to doxorubicin as the npr2
strain, which was the
most resistant single-knockout strain for the anthracycline
(Fig. 7, B and D). In summary,
our data indicate that NPR2 and SKY1 are epistatic. In the
case of parallel pathways, the drug resistance of the double knockout strain
would have been additive or greater than additive. Given the phenotype
observed, NPR2 may thus act in mutual regulatory routes with
SKY1 to mediate the cytotoxicity of anticancer agents.
|
| Discussion |
|---|
|
|
|---|
cells were
resistant to cisplatin and the anthracycline drug doxorubicin and
hypersensitive to cadmium chloride. Whereas Rousselet et al.
(1995
cells did not display reduced platinum accumulation
compared with isogenic NPR2+ cells. This seems to exclude
a role for the high-affinity copper transporter Ctr1p, which was very recently
identified as a regulator of cisplatin uptake and sensitivity
(Ishida et al., 2002
cells did not show altered sensitivity to
copper sulfate. Although the combination of cisplatin resistance and
hypersensitivity to cadmium chloride may be poorly understood, it is not
unprecedented in either yeast (Perego et
al., 1997
cells, because we did not see
cross-resistance to etoposide, another well known inhibitor of this enzyme
(Pratt et al., 1994
cells, dur3
cells were neither resistant
nor hypersensitive to cisplatin or doxorubicin compared with their isogenic
parent. Our data thus indicate that NPR2 exerts its cytotoxic effects
in response to either cisplatin or doxorubicin independent of the nitrogen
permease DUR3. Although we can not dismiss a tentative role of
nitrogen transport in the drug-resistant phenotype of the npr2
cells, this suggests that a novel function of NPR2 (unrelated to
nitrogen transport) might be involved.
A possible mechanistic lead can be obtained by evaluation of the overall
phenotypes induced by disruption of NPR2 and SKY1. The
pattern of cross-resistance to cisplatin (but not oxaliplatin) and
doxorubicin, in combination with hypersensitivity to cadmium chloride in
npr2
cells, is highly reminiscent of our previous data for
sky1
cells (Schenk et al.,
2002
). In addition, the npr2
strain did not show
reduced platinum or doxorubicin accumulation and displayed an enhanced rate of
spontaneous mutation compared with the isogenic parent, similar to the
sky1
strain that we characterized earlier
(Schenk et al., 2002
). We
tested npr2
sky1
double-knockout cells for
cisplatin and doxorubicin resistance, and concluded that NPR2 and
SKY1 are epistatic. These data suggest that NPR2 may act in
mutual regulatory routes with SKY1. The Sky1p protein is believed to
phosphorylate several serine-rich proteins, including its well established in
vivo S. cerevisiae substrate Npl3p
(Yun and Fu, 2000
). Although
Rousselet et al. (1995
)
correctly noted that Npr2p (SWISS-PROT accession number P39923
[GenBank]
) is a
serine-rich protein as well, it does not comprise a true consensus site for
serine phosphorylation by Sky1p (Yun and
Fu, 2000
). It is, therefore, not very likely that Sky1p might
directly regulate Npr2p through straightforward phosphorylation. According to
the Saccharomyces Genome Database
(http://www.yeastgenome.org/),
Npr2p may be a transcription factor, as inferred from electronic annotation.
It is thus conceivable that Npr2p functions as a transcriptional modulator for
specific downstream components within a tentative SKY1 network.
Although we can not dismiss a possible role of Npr2p in the transcriptional
regulation of SKY1, the transcription of SKY1 is probably
not regulated by cisplatin. In previous experiments, we did not detect
alterations in SKY1 RNA levels upon cisplatin treatment of yeast
cells (Schenk et al., 2001
).
In fact, our data imply that NPR2 and SKY1 are connected in
a shared regulatory network instead of just a single hierarchic cascade.
Because npr2
cells were more resistant to doxorubicin, whereas
BY-sky1
cells were more resistant to cisplatin, it seems
unlikely that one component would simply act directly upstream from the other
to mediate the same response (i.e., cell death) to different stimuli (i.e.,
cisplatin and doxorubicin). Based on the drug sensitivity profile and mutator
phenotype of S. cerevisiae sky1
cells, we previously proposed
that Sky1p might play a significant role in mismatch repair (MMR), base
excision repair, and/or Rev3p-dependent pathways
(Schenk et al., 2002
). By
analogy, Npr2p might also be involved in such processes. Because cisplatin and
doxorubicin resistance (Drummond et al.,
1996
; Durant et al.,
1999
) and an elevated mutation rate
(Branch et al., 1995
) have been
associated with loss of MMR in several cell types, MMR deficiency could, for
instance, underlie these phenomena in npr2
cells. Because MMR
deficiency has also been linked with tolerance to DNA methylation damage in
human cancer cells (Branch et al.,
1995
), one might argue that the absence of cross-resistance to the
methylator MNNG contradicts a role for MMR. However, in S.
cerevisiae, mutations in MMR genes do not necessarily render the cells
more tolerant to MNNG (Bawa and Xiao,
1997
), in line with our present data.
Irrespective of the underlying mechanisms, our data identify S.
cerevisiae NPR2 as a novel gene involved in cell kill provoked by the
anticancer drugs cisplatin and doxorubicin. Based on primary sequence
conservation, we found NPRL2/Gene21 as the most credible
candidate human NPR2 homolog (using
http://www.ncbi.nlm.gov/blast/Blast.cgi).
There are three regions of high similarity between the predicted polypeptide
sequence encoded by the human NPRL2/Gene21 cDNA (RefSeq
NP_006536
[GenBank]
.1) and Npr2p, with 32% identity (53% similarity) over 152 amino
acids, 36% identity (50% similarity) over 119 amino acids, and 36% identity
(54% similarity) over 55 amino acids. Strikingly,
NPRL2/Gene21 is one of the candidate tumor suppressor genes
residing on a 120-kb critical tumor homozygous deletion region of human
chromosome 3p21
[PDB]
.3 found in lung and breast cancers
(Lerman and Minna, 2000
).
Recently, it was reported that NPRL2/Gene21 is, indeed, one
of the candidates whose adenovirus vector-mediated expression results in tumor
suppressor activity in vitro and in vivo
(Ji et al., 2002
). Our next
aim will be to see whether this human tumor suppressor gene might also be
involved in processes altering sensitivity to anticancer drugs. In addition,
it will be highly interesting to assess the possible interplay between
NPRL2/Gene21 and other components controlling drug
sensitivity, such as the SKY1 homolog SRPK1. The finding
that NPRL2/Gene21 resides on human chromosome 3 is of
special interest with respect to a tentative role in MMR. Chauhan et al.
(2000
) recently tested the
hypothesis that a single wild-type copy of the key MMR gene hMLH1 on
chromosome 3 might be exclusively responsible for the restoration of MMR
function in MMR-deficient HCT116 human colon cancer cells, upon transfer of a
whole copy of the chromosome. However, profound inhibition of hMLH1 expression
did not abrogate DNA MMR activity in the corrected cells, suggesting either
that hMLH1 is expressed in large excess compared with that required for
functional MMR, or that chromosome 3 contains another uncharacterized MMR
gene. Given our data for yeast npr2
cells, it is tempting to
speculate that the human Npr2p homolog is somehow involved in MMR, and that
the introduction of an extra copy of NPRL2/Gene21 on human
3p21
[PDB]
.3 thus aids in the restoration of MMR function in HCT116 cells upon whole
chromosome transfer.
| Acknowledgements |
|---|
::lox-URA3-lox geneblaster. | Footnotes |
|---|
Preliminary parts of this work were presented in abstract form at the 92nd Annual Meeting of the American Association for Cancer Research; 2001 March 2428; New Orleans, LA [Schenk PW, Boersma AWM, Brok M, Brandsma JA, Den Dulk H, Brouwer J, Burger H, Stoter G, and Nooter K (2001) Cisplatin resistance in vitro: possible sensitivity genes in translational research from yeast to man. Proc Am Assoc Cancer Res 42:abstract 4998].
ABBREVIATIONS: NER, nucleotide excision repair; YNB, yeast nitrogen base; YPD, yeast extract/peptone/dextrose; PCR, polymerase chain reaction; NPR2, nitrogen permease regulator 2; SKY1, SR-protein-specific kinase from budding yeast; SRPK1, SR-protein-specific kinase; kb, kilobase(s); AAS, atomic absorption spectrometry; HPLC, high-performance liquid chromatography; MNNG, N-methyl-N'-nitro-N-nitrosoguanidine; MMR, mismatch repair.
1 The data on SRPK1 expression in germ cell tumors were presented in Plenary
Session 2 of the 14th EORTC-NCI-AACR Symposium on Molecular Targets and Cancer
Therapeutics; 2002 Nov 1922; Frankfurt, Germany [Schenk PW, Boersma
AWM, Brok M, Brandsma JA, Den Dulk H, Burger H, Brouwer J, Stoter G and Nooter
K (2002) Mechanisms of cisplatin resistancerole of yeast SKY1 and its
human homolog SRPK1. Eur J Cancer 38(Suppl.
7):15.]. ![]()
Address correspondence to: Dr. K. Nooter, Department of Medical Oncology, Erasmus University Medical Center Rotterdam, Josephine Nefkens Building room Be422, P.O. Box 1738, 3000 DR Rotterdam, The Netherlands. E-mail: k.nooter{at}erasmusmc.nl
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