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Unità di Farmacologia, Dipartimento Farmacobiologico (A.L., D.C.C.) and Dipartimento Farmacochimico (G.C., G.F., F.L., V.T.), Facoltà di Farmacia, Università di Bari, Bari, Italy; and Istituto di Biofisica, Consiglio Nazionale delle Ricerche, Genova, Italy (A.P., E.B., M.P.)
Received July 28, 2005; accepted October 20, 2005
| Abstract |
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CLC-K channels are also expressed in the inner ear, where they are involved in endolymph secretion, a mechanism pivotal for sound signal transduction (Estévez et al., 2001
). Furthermore, for a correct expression and function, CLC-K channels require the presence of the barttin
subunit (Estévez et al., 2001
; Waldegger et al., 2002
). Barttin produces an increase of CLC-K channel expression at the plasma membrane (Estévez et al., 2001
; Waldegger et al., 2002
). Mutations in barttin cause type IV Bartter's syndrome, a disease characterized by renal failure accompanied by sensorineural deafness (Birkenhäger et al., 2001
). In support of the hypothesis that defects in barttin impair function of both CLC-K channels, simultaneous CLC-Ka and CLC-Kb mutations result in a phenotype that mimics type IV Bartter's syndrome (Schlingmann et al., 2004
).
It is noteworthy that a polymorphism of CLC-Kb has recently been reported that confers a gain of function of the channel-activating CLC-Kb activity (Jeck et al., 2004a
) in vitro and predisposes to hypertension in vivo (Jeck et al., 2004b
).
The involvement of these Cl channels in various physiopathological processes arouses a considerable interest to identify specific high-affinity ligands as tools to explore mechanisms of gating and permeation and as a starting point for drug development.
In previous studies, we have identified compounds with two chlorophenoxy groups capable of blocking rat CLC-K1 currents (Liantonio et al., 2002
). Subsequently, we recognized 3-phenyl-CPP as the minimal structure capable of blocking CLC-K1 and CLC-Ka in a reversible and Cl ion-dependent manner by interacting with the channel pore from the extracellular side (Liantonio et al., 2004
). The highly homologous CLC-Kb channel was found to be 5-fold less sensitive to 3-phenyl-CPP compared with CLC-Ka (Picollo et al., 2004
). We identified the amino acid residues that are responsible for the difference in drug sensitivity and thus probably form part of the drug-binding site. In particular, asparagine 68 in CLC-Ka plays a pivotal role for the blocking activity of 3-phenyl-CPP, because exchanging it with a negatively charged aspartate (N68D), as found in CLC-Kb, markedly reduces drug sensitivity. Furthermore, Asn68, together with Gly72, is also pivotal for the more pronounced activity of the unrelated stilbene blocker DIDS on CLC-Ka with respect to CLC-Kb (Picollo et al., 2004
).
In this study, we demonstrate that in addition to this blocking binding site, CLC-K channels also present an activating binding site that controls opening of the channels. We show that niflumic acid (NFA), a drug belonging to a class of fenamates usually used as nonsteroidal anti-inflammatory drugs, produces an increase of currents carried by CLC-Ka and CLC-Kb. In contrast to this activating effect, application of flufenamic acid (FFA) derivatives or high doses of NFA produced an inhibitory effect on CLC-Ka. The evaluation of the sensitivity to fenamates of CLC-Kb and of CLC-K mutants (Picollo et al., 2004
), together with a molecular modeling study of the organic ligands, provides insight into the mechanisms of activation and inhibition by fenamates.
This class of molecules represents until now the unique tool able to open and to block renal CLC-K channels and thus provides a starting point for the identification of drugs either with diuretic action or useful in the treatment of type III Bartter's syndrome.
| Materials and Methods |
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Similar voltage-clamp pulse protocols for CLC-Ka and CLC-Kb, with a longer pulse duration for CLC-Kb, were used. From a holding potential of 30 mV, after a prepulse to 60 mV (or 100 mV) for 100 or 200 ms (for CLC-Ka and CLC-Kb, respectively), voltage was stepped from 140 to 80 mV in 20-mV increments for 200 or 500 ms (for CLC-Ka and CLC-Kb, respectively), followed by a final tail pulse to 100 mV. To evaluate the on-set and washout of drug effects, a pulse to 60 mV was applied every 2 s.
As a control, we routinely applied a solution containing 100 mM I that blocks currents carried by CLC-K channels but not endogenous currents (Pusch et al., 2000
) and used the residual current in 100 mM I to estimate the contribution of endogenous currents (Picollo et al., 2004
).
Apparent dissociation constants for drugs showing blocking activity, KD, were determined by calculating the ratio of the steady-state current in the presence and in absence of the drug and fitting the ratios to the equation I(c)/I(0) = 1/(1 + c/KD) where c is the concentration. Errors in figures and in the text are indicated as S.E.M.
NFA Derivatives. The following drugs were purchased from Sigma-Aldrich (Milano-Italy): NFA, FFA, mefenamic acid (MFA), meclofenamic acid (MCFA), tolfenamic acid (TFA), and 2-(phenylamino)benzoic acid (DPC).
Remaining compounds were synthesized according to previously reported procedures; MT-4, MT-6, and MT-7 were prepared by condensation of 2-chloronicotinic acid with the appropriate substituted amines (Sherlock et al., 1988
). The phenoxypyridinecarboxylic acids (Li-3, Li-10, Li-6, and Li-11) were synthesized by condensing 2-chloronicotinic acid with the opportune sodium phenoxide using an excess of the phenol (Villani et al., 1975
). For Li-15, the condensation was modified using equimolar quantities of the acid and the phenolate in DMF (Fujiwara and Kitagawa, 2000
). EB-168 was synthesized by treating commercially available NFA with an excess of borane methyl sulfide complex in dry tetrahydrofuran. Compounds were daily prepared in dimethyl sulfoxide stock solutions, and the final concentrations were obtained by appropriate dilution with the solution used for the electrophysiological recordings. (See Fig. 3 for structures of compounds listed in this paragraph.)
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In Table 1, we report the number of low energy conformers found after the conformational analysis carried out with and without water. When available, as in the case of DPC, FFA, MCFA, MFA, NFA, and TFA molecules, the starting geometry parameters were derived from X-ray data from Cambridge Crystallographic Data Center (Cambridge Structural Database, ver 5.26).
For 3-phenyl-CPP, whose X-ray data were not available, the molecule was first constructed by fragments, the molecular geometry was optimized to DFT B3LYP/6-31G* level theory and then submitted for further calculations (Spartan'04; Wavefunction, Inc., Irvine, CA). Except for molecular mechanics and semiempirical models, the calculation methods used in Spartan'04 have been documented by Kong et al. (2000
). We observed that the most populated low energy conformer families are within the 3.0 kcal/mol range; among them, the lowest energy conformer was selected and used for the overlay shown in Fig. 9B. The conformers were superimposed at the level of the aromatic ring not directly bound to the carboxylic group, and of the heteroatoms, nitrogen or oxygen, bridging the aromatic rings.
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| Results |
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Application of 200 µM NFA induces an increase of CLC-Ka currents both at negative and positive potentials (Fig. 1A). The onset of the effect was rapid, and the return of the currents to control value upon removal of drug was reached within 7 to 9 min (Fig. 1B). The NFA-mediated current increase was practically voltage-independent (Idrug/I0 = 2.38 ± 0.12 at 60 mV and Idrug/I0 = 2.20 ± 0.3 at 140 mV). At all tested potentials, NFA induced an increase of the current amplitude without producing kinetic modifications. Although a current increase was seen for concentrations between 50 and 1000 µM, NFA blocked CLC-Ka currents at 2 and 2.5 mM (Fig. 1C). This biphasic dose-response relationship indicates that the mechanism of action of NFA is complex and probably involves two functionally different binding sites with opposite effects.
Dependence of NFA Activation on Extracellular Calcium Concentration. It is known that CLC-K channel activity is strongly enhanced by extracellular calcium in the millimolar range (Estévez et al., 2001
; Waldegger et al., 2002
). We examined whether calcium may interfere with the activating effect of NFA. Lowering [Ca2+]ext from 10 to 1.8 mM reduces CLC-Ka currents (data not shown) and, importantly, the relative activating effect of 200 µM NFA was significantly larger in low calcium (Fig. 2). A possible interpretation of increased potency of NFA in low calcium is that in this condition, a larger population of channels is available for opening by NFA.
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Structure-Activity Study. Searching to determine the structural requisites to bind to and to modulate CLC-Ka activity, we evaluated the effect of a series of compounds, modifying in different parts the NFA structure (Fig. 3). We determined the potency of the various derivatives by comparing the effect produced by each drug at 200 µM, a concentration at which the NFA-mediated activating effect was evident.
Substitutions on the Phenyl Group. Derivative MT-7, in which the CF3 group on the phenyl ring is shifted from the meta to the para position with respect to the anilinic nitrogen, is still able to produce an increase of CLC-Ka currents, albeit with a reduced potency (Idrug/I0 ratio of 1.89 ± 0.04; Fig. 4A). Substitution of the CF3 group with a chlorine atom compromised the activating drug activity much more drastically. Indeed, application of derivatives MT-6 and MT-4, which have a chlorine atom in the meta or para position, respectively, only slightly increased or produced no effect, respectively (Fig. 4A). These data indicate that an electronegative effect that reduces the density of the electron cloud of this aromatic ring is not sufficient to confer drug activity. Rather, the presence of the 3-fluoromethyl group seems to confer a specific bulkiness in this part of the molecule suitable for the interaction with the activating binding site.
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Isosteric Substitution of the Anilinic Nitrogen. Changing the anilinic nitrogen that links the two rings abolished activation of CLC-Ka, independent of other substitutions in the phenyl ring as indicated by the fact that application of each isosteric derivative (substances Li-15, Li-3, Li-10, Li-6, and Li-11 in Fig. 3) at 200 µM produced no significant change in CLC-Ka currents (Fig. 5A). To exclude the formal possibility that the lack of effect of substances Li-15, Li-3, Li-10, Li-6, and Li-11 was due to a compensation of activation and block, we evaluated them also at 50 µM. If block at 200 µM had masked an activating effect, an increase of currents would be expected at the lower concentration of 50 µM. However, none of these derivatives produced a significant effect at this concentration (data not shown).
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Although the potentiation of CLC-Ka by NFA was dependent on the presence of a CF3 group in meta position on the phenyl group, a modification regarding this region of the molecule on FFA led to an increase of the blocking activity. In particular, the order of potency of FFA derivatives was MCFA > MFA > TFA > FFA (Fig. 5A; Table 2). The elimination of all substituents on this phenyl group (molecule DPC, Fig. 3) significantly reduced the drug inhibitory activity (Fig. 5A; Table 2). These results suggest that the substitution of the pyridinic group with a phenyl group completely shifted the affinity of NFA from an activating binding site to an inhibitory binding site with some different structural requirements.
We also evaluated the effect of 3-phenyl-CPP, the CLC-K blocker with highest known affinity (Liantonio et al., 2004
; Picollo et al., 2004
). In agreement with a previous study (Picollo et al., 2004
), 3-phenyl-CPP inhibited CLC-Ka currents with a potency reported in Table 2.
Effect of Fenamates on CLC-Kb. Although highly homologous (Kieferle et al., 1994
), the two CLC-K isoforms show a different pharmacological profile (Picollo et al., 2004
). We evaluated the sensitivity of CLC-Kb to fenamates using NFA and FFA, the two lead compounds with activating and inhibitory effect on CLC-Ka. At 200 µM, the effect of NFA on CLC-Kb is more pronounced compared with CLC-Ka, with a Idrug/I0 ratio of 3.5 ± 1.0.
It is noteworthy that in contrast to what we observed with CLC-Ka, application of 200 µM FFA produced an increase of CLC-Kb currents with a Idrug/I0 ratio of 2.09 ± 0.9 at 60 mV (Fig. 7). Furthermore, even at high concentrations (>1 mM), NFA was incapable of blocking CLC-Kb sustained currents, producing a potentiationat all tested concentrations (data not shown).
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We next tested NFA on all mutants previously reported both for CLC-Ka and CLC-Kb (Picollo et al., 2004
). Each mutant was sensitive to NFA with a potency comparable with that observed in the related wild type (Fig. 8). However, it is interesting that NFA produced a slightly smaller effect on CLC-Ka N68D with respect to WT (Fig. 8), indicating that the activating and inhibitory binding site may not be completely independent.
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At high concentrations, such as 2 mM, NFA is still capable of producing a block of CLC-Ka N68D mutant, although less potently with respect to CLC-Ka wild type (Idrug/I0 = 0.75 ± 0.05 and 0.67 ± 0.04 at 60 mV, respectively). Modeling Study. Conformational search studies show that all examined NFA derivatives exhibit a restricted number of low energy conformers characterized by the presence of an intramolecular hydrogen bond between the amino group and the oxygen atoms of carboxylic moiety. For all examined molecules, the calculated low energy conformations include the ones found in the X-ray crystal structures.
The lowest energy conformer of NFA shows a quite planar structure that is different from the corresponding conformers of the remaining molecules in which the two aromatic rings lie on different planes (Fig. 9A). The NFA planar structure is the result of the intramolecular hydrogen bonding as well as of the conjugation of the amino group lone pair with the electron-withdrawing pyridine ring. This conjugation is less effective in the FFA analogs because of the substitution of the pyridine system with a phenyl system; at the same time, this substitution introduces an additional hydrogen atom in the ortho position to the amino group, causing a steric hindrance in the resulting diphenyl system that forces the noncoplanar arrangement of the aromatic rings (Dhanaraj and Vijayan, 1988
). This behavior is enhanced in the compounds having bulky substituents in the ortho positions of the aniline moiety, such as MCFA, MFA, and TFA (Fig. 9A).
Regarding 3-phenyl-CPP, all lower energy conformer families exhibit the two aromatic rings lying on different planes because of their molecular flexibility. An overlay of the lowest energy conformers of the lead molecules indicates that all blocking compounds, such as FFA and 3-phenyl-CPP, displayed nonplanar geometries in contrast to NFA (Fig. 9B).
| Discussion |
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Starting from NFA as the lead compound, and considering all double-ring compounds shown in Fig. 3, the following structural requisites for an efficient activation of CLC-Ka emerged: the acidic carboxylic group, two aromatic rings (one of which should be a pyridinic ring), a CF3 group in the meta position on the phenyl group, and an anilinic moiety connecting the two rings. Combinations of these requisites enable efficient blocking activity. These include the carboxylic group and the two aromatic moieties linked by an electronegative atom. All FFA derivatives produced a rapid and reversible block with a mechanism of action resembling that of 3-phenyl-CPP. It is noteworthy that the presence of these groups is pivotal for blocking activity also in the 3-phenyl-CPP structure. Furthermore, as indicated by the different potency shown by the FFA derivatives, in line with what was observed with 3-phenyl-CPP structure modifications (Liantonio et al., 2004
) the presence of an electronegative group, reducing the charge the electronic cloud of one of the aromatic rings of FFA derivatives, increased the drug affinity toward the binding site.
The fact that NFA at high concentration is able to block CLC-Ka and that FFA is able to open CLC-Kb indicates that both drugs can bind the activating and blocking binding sites but with different affinity. The presence of a pyridinic group favors binding to the activating binding site, although it cannot be excluded that a certain drug amount binds the inhibitory binding site at low concentrations. In support of this, the activating effect of 200 µM NFA was more evident on CLC-Kb, the CLC-K isoform that is much less sensitive to blockers (Picollo et al., 2004
). In parallel, the presence of two phenyl groups, as occurs in FFA derivatives, confers a larger affinity toward the inhibitory binding site on CLC-Ka. However, in this case, it seems that the same molecules are also capable of interacting with the activating binding site, as evidenced by the FFA-induced increase of CLC-Kb currents.
In a previous study, we mapped the binding site of 3-phenyl-CPP and DIDS on CLC-Ka, pinpointing the neutral amino acid Asn68 as crucial for 3-phenyl-CPP-mediated inhibition, because mutating it to the negatively charged aspartate (N68D), as occurs in CLC-Kb, markedly reduced drug sensitivity (Picollo et al., 2004
). All FFA derivatives were much less potent in blocking CLC-Ka N68D mutant with respect to CLC-Ka wild type, indicating that Asn68 is pivotal for drug-blocking activity. Furthermore, we showed that FFA loses its blocking activity on CLC-Kb, producing a potentiation of CLC-Kb. Thus, we speculate that, as in the case of 3-phenyl-CPP (Picollo et al., 2004
), the electrostatic interaction between amino acids located in the external vestibule of the channel pore and the negatively charged group of FFA derivatives might either permit (CLC-Ka) or impede (CLC-Kb) the interaction of the inhibitors. At high concentrations, NFA was able to block CLC-Ka N68D mutant with only slightly less potency with respect to wild type. This might suggest that the inhibitory effect of NFA and FFA is mediated by different blocking binding sites. On the other hand, considering the possibility of a unique blocking binding site, the presence of the pyridinic ring could account for the different behavior of NFA with respect to FFA on CLC-Ka N68D mutant. In fact, the reduced activity of FFA on mutant N68D is probably caused by an electrostatic repulsion (Picollo et al., 2004
). The carboxylic group of NFA may have a lower charge density caused by the protonation of the pyridinic ring, an event that can occur at the experimental pH. This could allow NFA to get closer to the blocking binding site than FFA in the mutant.
One of the most important questions regarding the NFA action is whether the two opposite effects, potentiation and block, are mediated by drug interaction with two different binding sites. In contrast to the FFA blocking effect, the NFA-induced increase of CLC-Ka currents was reproducible on all mutants described previously for the identification of 3-phenyl-CPP binding site (Picollo et al., 2004
), although with a slightly smaller potency in the case of CLC-Ka N68D. Overall, these data indicate the presence of two different binding sites mediating the activating and blocking effects. However, it should be kept in mind that, as we hypothesized for the inhibitory binding site (Picollo et al., 2004
), the effective activating binding site could be quite deep within the pore. Thus, it should not be excluded that the two binding sites are partially overlapping. The precise identification of the activator site on CLC-K channels will be needed to conclusively resolve this issue.
We attempted to explain the different drug activity by performing modeling investigations that allowed us to compare the spatial geometry profiles associated at NFA, FFA, and 3-phenyl-CPP structures. The most important conclusion is that NFA and its analogs MT-4 and MT-7 that behave as CLC-Ka openers show nearly planar conformations, whereas FFA derivatives and 3-phenyl-CPP, exhibiting a CLC-Ka blocking activity, are forced to assume a noncoplanar arrangement of the aromatic rings. Overlaying the lowest energy conformers reveals that all blocking compounds display nonplanar geometries compared with NFA and that the increasing planarity distortion of the aromatic rings ranging from DPC, FFA, MFA, and TFA to MCFA parallels the observed increasing blocking activity in the same order.
The involvement of CLC-Kb in type III Bartter' syndrome and the parallel lack of drug treatment arouse a great interest toward molecules able to open CLC-K channels. The use of a compound similar to NFA for a treatment of Bartter's syndrome could improve diuresis in a direct manner through an increase of CLC-K channel activity and in an indirect manner through cyclooxygenase inhibition. Indeed, type III Bartter's syndrome patients show elevated prostaglandin activity (Reinalter et al., 2002
), and NFA belongs to the class of nonsteroidal anti-inflammatory drugs. However, the activating effect of NFA on mutants of CLC-Kb has not been tested in the current study.
At the same time, considering the involvement of CLC-K channels in the mechanisms of urine concentration, specific inhibitors could represent a new class of drugs with diuretic activity (Fong, 2004
). From this regard, it noteworthy that whereas CLC-K2/Kb is clearly restricted to basolateral membranes of renal epithelial cells, the localization of CLC-K1/Ka is still controversial. Both basolateral and apical membranes (Uchida et al., 1995
) or only basolateral localization (Vandewalle et al., 1997
) have been reported. Thus, CLC-K inhibitors may have to reach their targets via the basolateral fluid. This means that effective concentrations must be reached in the renal interstitium in vivo for obtaining the diuretic effect, and the relatively low affinity for the blockers may thus limit the effectiveness. However, this alternative route could ensure drug activity also in some pathological conditions, such as decreased renal blood flow or renal failure, in which the therapeutic effectiveness of furosemide-like diuretics could be seriously compromised.
Besides, a polymorphism of CLC-Kb was recently reported (T481S) that, in contrast to mutations responsible of Bartter's syndrome, confers a gain of function. Indeed, T481S mutant channels led to a dramatic increase in CLC-Kb currents when expressed in oocytes (Jeck et al., 2004a
). This polymorphism was associated with hypertension in one study (Jeck et al., 2004b
). However, an involvement of this polymorphism was not seen in other studies (Kokubo et al., 2005
; Speirs et al., 2005
). Thus, a specific inhibition of CLC-K channels as a treatment of such a condition remains speculative. Although the CLC-K inhibitors identified up to now showed a major affinity toward the CLC-Ka isoform, they represent drugs with good therapeutic potential, permitting a reduction of CLC-Ka activity for counteracting the excessive CLC-Kb activity.
| Acknowledgements |
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| Footnotes |
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A.L. and A.P. contributed equally to this work.
D.C.C. and M.P. contributed equally to this work.
Article, publication date, and citation information can be found at http://molpharm.aspetjournals.org.
ABBREVIATIONS: CLC-K, kidney CLC chloride channels; CPP, 2-p-(chlorophenoxy)propionic acid; DIDS, 4,4'-diisothiocyanato-2,2'-stilbenedisulfonic acid; NFA, niflumic acid; FFA, flufenamic acid; MFA, mefenamic acid; MCFA, meclofenamic acid; TFA, tolfenamic acid; DPC, 2-(phenylamino)benzoic acid; WT, wild type.
Address correspondence to: Prof. Diana Conte Camerino, Section of Pharmacology, Department of Pharmacobiology, Faculty of Pharmacy, University of Bari, Via Orabona, 4, Campus, I-70125 Bari, Italy. E-mail: conte{at}farmbiol.uniba.it
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