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Receptor Type 1 (TGF
RI) Kinase Activity but Not p38 Activation Is Required for TGF
RI-Induced Myofibroblast Differentiation and Profibrotic Gene ExpressionScios Inc., Fremont, California (A.M.K., N.J.G., Y.W., D.D., Y.-W.L., G.O., D.Q., A.L., K.M., T.-T.T., J.Y.M., A.M., S.D., S.C., A.A.P., L.S.H.); and Nebraska Medical Center, Omaha, Nebraska (F.-Q.W., X.L., S.I.R.)
Received December 9, 2005; accepted April 4, 2006
| Abstract |
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(TGF
) is a major mediator of normal wound healing and of pathological conditions involving fibrosis, such as idiopathic pulmonary fibrosis. TGF
also stimulates the differentiation of myofibroblasts, a hallmark of fibrotic diseases. In this study, we examined the underlying processes of TGF
RI kinase activity in myofibroblast conversion of human lung fibroblasts using specific inhibitors of TGF
RI (SD-208) and p38 mitogen-activated kinase (SD-282). We demonstrated that SD-208, but not SD-282, inhibited TGF
-induced SMAD signaling, myofibroblast transformation, and collagen gel contraction. Furthermore, we extended our findings to a rat bleomycin-induced lung fibrosis model, demonstrating a significant decrease in the number of myofibroblasts at fibroblastic foci in animals treated with SD-208 but not those treated with SD-282. SD-208 also reduced collagen deposition in this in vivo model. Microarray analysis of human lung fibroblasts identified molecular fingerprints of these processes and showed that SD-208 had global effects on reversing TGF
-induced genes involved in fibrosis, inflammation, cell proliferation, cytoskeletal organization, and apoptosis. These studies also revealed that although the p38 pathway may not be needed for appearance or disappearance of the myofibroblast, it can mediate a subset of inflammatory and fibrogenic events of the myofibroblast during the process of tissue repair and fibrosis. Our findings suggest that inhibitors such as SD-208 may be therapeutically useful in human interstitial lung diseases and pulmonary fibrosis.
-smooth muscle actin, myofibroblasts are considered an intermediate between a fibroblast and a true smooth muscle cell. As such, they are involved in wound healing and contraction. There are substantial data showing the presence of myofibroblasts in lung tissues from patients with pulmonary fibrosis (Phan, 2002
TGF
, a major player in the conversion of fibroblasts to myofibroblasts, is a pleiotropic growth factor involved in multiple biological processes including cell proliferation, fibrosis, tissue repair, inflammation, apoptosis, cell differentiation, cell adhesion, and motility (Sporn and Roberts, 1992
; Massague et al., 1994
; Grande, 1997
). TGF
levels are elevated in the bronchoalveolar lavage fluid of patients with pulmonary fibrosis (Kuroki et al., 1995
; Ludwicka et al., 1995
) and in the lungs of animals with experimentally induced lung fibrosis (Coker et al., 1997
). TGF
signals through heteromeric receptor complexes consisting of type I (TGF
RI) and type II (TGF
RII) serine-threonine kinase receptors. Upon ligand binding, TGF
RII transphosphorylates TGF
RI. The activated receptor then phosphorylates and activates members of the SMAD family of proteins. Receptor SMADs subsequently bind to coSMAD4 and translocate into the nucleus, where they regulate the transcriptional response of target genes.
Besides signaling through SMADs, several additional pathways have been shown to mediate the downstream signaling from TGF
RI. These include the p38 mitogen-activated kinase (MAPK) (Bhowmick et al., 2001
; Bakin et al., 2002
), the c-Jun NH2-terminal kinase (Atfi et al., 1997
), the extracellular-regulated kinase (Frey and Mulder, 1997
), and the phosphatidylinositol kinase pathways (Bakin et al., 2000
). The p38 pathway is involved in a variety of biological responses to the TGF
signaling, such as migration of smooth muscle cells (Hedges et al., 1999
), neuronal differentiation of PC-12 cells (Iwasaki et al., 1999
), chondrogenesis of ATDC-5 cells (Nakamura et al., 1999
), and cardiomyocyte differentiation (Monzen et al., 1999
). Despite the numerous implications of p38 signaling in the TGF
pathway, the significance of TGF
-mediated p38 signaling in pulmonary fibrosis and myofibroblast transformation is not well defined.
In this study, we used a combination of cDNA arrays and small molecule inhibitors of TGF
-R1 and p38 MAP kinase to begin to delineate the molecular events downstream of TGF
-R1. We identify a number of TGF
-regulated genes and assess which genes are regulated by p38. In addition, we show that small molecule inhibitors of TGF
RI, but not p38, block SMAD signaling, inhibit an in vitro model of fibrotic tissue remodeling (fibroblast mediated collagen gel contraction), and prevent the transformation of fibroblasts to myofibroblasts in vivo and in vitro, as measured by expression of
-smooth muscle actin.
| Materials and Methods |
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1 (R&D Systems, Minneapolis, MN) in the presence or absence of 400 nM SD-208 or 400 nM SD-282. Concentrations of inhibitors were chosen based on IC50s in HLF cell-based assays (data not shown and Fig. 2; IC50, 70-80 nM). Induction with TGF
was carried out for various times (7.5, 24, and 72 h) after which RNA was harvested by lysing the cells in RLT buffer (QIAGEN, Valencia, CA) and frozen at -80°C.
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RI kinase inhibitor SD-208 and p38
MAP kinase inhibitor SD-282 were synthesized by the Medicinal Chemistry Department at Scios, Inc. and dissolved in dimethyl sulfoxide. They were designed from medicinal chemistry efforts optimizing high-throughput screening leads into potent, selective inhibitors with acceptable pharmaceutical properties. SD-282 is an indole-5-carboxamide, ATP-competitive inhibitor of p38
MAP kinase, and SD-208 is a 2,4-disubstituted pteridine, ATP-competitive inhibitor of TGF
RI kinase (Fig. 1). SD-282 was prepared by functionalizing the 3-position of the corresponding indole-5-carboxamide through treatment with oxalyl chloride in methylene chloride followed by addition of dimethylamine. The resulting material was purified by silica gel chromatography and then converted to its hydrochloride salt form. SD-208 was prepared by heating 4-chloro-2-(5-chloro-2-fluorophenyl)pteridine with 4-aminopyridine and triethylamine in dimethylformamide. The resulting material was purified by silica gel chromatography and then converted to its hydrochloride salt form.
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-33P]ATP from PerkinElmer Life and Analytical Sciences (Boston, MA). The counts incorporated were determined by counting on a microplate scintillation counter (TopCount; PerkinElmer Life and Analytical Sciences). The ability of compounds to inhibit the kinase was determined by comparing the counts incorporated in the presence of compound to those in the absence of compound.
Western Blot and ELISA Analysis. HLF cells were serumstarved for 24 h in FGM (Cambrex Bio Science Walkersville, Inc.) containing no serum or FGF but supplemented with 0.2% BSA and 50 µg/ml vitamin C. To analyze SMAD phosphorylation, cells were treated with 2 ng/ml TGF
1 for 30 min in the presence of increasing concentrations of SD-208 or SD-282 inhibitor as indicated. To analyze induction of
-smooth muscle actin, CTGF, and PAI-1, cells were treated with 2 ng/ml TGF
1 for 7, 24, or 72 h in the presence of 400 nM SD-208 or SD-282. Total cell lysates were prepared in MPER buffer (mammalian protein extraction reagent; Pierce, Rockford, IL) or in radioimmunoprecipitation assay (10 nM Tris, pH 8.0, 150 mM NaCl, 1% Triton X-100, 1% deoxycholate, and 0.1% SDS; Roche, Indianapolis, IN) containing protease and phosphatase inhibitor cocktails. Aliquots of the cell lysates were fractionated on SDS-polyacrylamide gels and transferred to nitrocellulose membranes (Invitrogen, Carlsbad, CA). The membranes were blocked against nonspecific binding using 4% skim milk. Proteins were detected using specific primary antibodies and peroxidase-conjugated secondary antibodies. The antibody against phospho-SMAD2 was from Cell Signaling Technology (Beverly, MA); the mouse monoclonal antibody against SMAD2 was purchased from BD Biosciences (Palo Alto, CA); the CTGF polyclonal antibody was custom made (U. Schellenberger, Scios Inc.); the monoclonal antibody against
-smooth muscle actin was purchased from Sigma (St. Louis, MO); the mouse monoclonal antibody against GAPDH was from Biogenesis (Poole, Dorset, UK); and the mouse monoclonal antibody against vimentin was from Affinity Bioreagents (Golden, CO). The blots were visualized by the SuperSignal West Femto detection system (Pierce) or the Amersham ECL detection system followed by quantitation using Image Quant 5.2 (GE Healthcare, Little Chalfont, Buckinghamshire, UK).
Phospho-SMAD ELISA assays were performed in 96-well platescoated with anti-SMAD2/3 monoclonal antibodies (100 ng/well; BD Biosciences) for 18 h at 4°C or2hat room temperature. To block nonspecific binding, excess antibody was removed and the wells were treated with blocking buffer (0.3% BSA/PBS) for 2 h at room temperature. The wells were rinsed three times with wash buffer (0.5% Tween 20/PBS), and cell lysates (10 µg of total protein) were added to each well and incubated overnight at 4°C. Wells were rinsed three times with wash buffer before adding a polyclonal anti-phospho-SMAD2/3 antisera diluted in 2% BSA/0.5% Tween 20/PBS. After a 2-h incubation at room temperature, wells were washed three times with wash buffer before developing with tetramethyl benzidine (Sigma). Reactions were stopped with 0.5 N H2SO4 after a 5- to 30-min incubation, and plates were read at an optical density of 450 nm in a SpectraMax 250 plate reader (Molecular Devices, Sunnyvale, CA). For PAI-1 ELISA analysis, Imulyse (Biopool International, Ventura, CA) kits were used according to the manufacturer's instructions.
In Vitro Immunofluorescence Analysis. To examine the TGF
-induced nuclear translocation of SMAD2, HLF cells were grown to 50 to 80% confluence in Lab-Tek Chamber Slides (Nalge Nunc International, Naperville, IL). Cells were serum-starved and treated with TGF
1 (2 ng/ml) and inhibitors as described above. After treatment, cells were washed with PBS and fixed for 15 min with 4% paraformaldehyde in PBS. Cells were then treated with 0.1% saponin in PBS for 10 min. After washing off the detergent, fixed cells were incubated with primary antibodies overnight at 4°C. Specific antibodies for SMAD2 were from Zymed Laboratories (South San Francisco, CA). After extensive washing, the biotinylated antirabbit IgG and fluorescein avidin D secondary antibodies (Vector Laboratories, Burlingame, CA) were added. The fluorescence images of SMAD2 were visualized by a Nikon microscope using Image-Pro plus 4.5 software (Media Cybernetics, Inc., Silver Spring, MD).
Collagen Gel Contraction. Native type I collagen (rat tail tendon collagen) was extracted from rat tail tendons by a method published previously (Bell et al., 1979
; Mio et al., 1996
). In brief, tendons were excised from rat tails without tendon sheath and other connective tissues. Repeated washing with Tris-buffered saline was followed by dehydration and sterilization with 50%, 75%, 95% and pure ethanol. Type I collagen was then extracted in 6 mM hydrochloric acid at 4°C. The supernatant was harvested by centrifugation at 3000g for 1 h at 4°C. Collagen concentration was determined by weighing a lyophilized aliquot from each lot of collagen solution.
Gels were prepared using a method described previously (Mio et al., 1996
, 1998
) that involves mixing rat tail tendon collagen, distilled water, and 4x Dulbecco's modified Eagle's medium so that the final mixture resulted in a physiologic ionic strength, 1x Dulbecco's modified Eagle's medium, and a pH of 7.40. Cells were trypsinized (trypsin-EDTA; 0.05% trypsin, 0.53 mM EDTA-4Na; Invitrogen) and suspended in 10 ml of complete FGM and counted with a Coulter Counter (Beckman Coulter, Fullerton, CA). HLF cells were pelleted and resuspended in basal FGM without serum or other growth factors at a density of 107 cells/ml. Cells were then mixed with the neutralized collagen solution so that the final cell density in the collagen solution was 5 x 105 cells/ml, and the final concentration of collagen was 0.75 mg/ml. Aliquots (0.5 ml/well) of the mixture of cells in collagen were cast into each well of 24-well tissue culture plates (BD Biosciences). After gelation was completed, within 20 min at room temperature, the gels were gently released from the 24-well tissue culture plates and transferred into 60-mm tissue culture dishes (three gels in each dish) that contained 5 ml of freshly prepared basal FGM with or without TGF-
1 (200 pmol/l) or inhibitors. The gels were then incubated at 37°C in a 5% CO2 atmosphere for 2 days, and the area of each gel was measured with an Optomax V image analyzer (Optomax, Burlington, MA) daily. Data were expressed as the percentage area compared with the original gel size.
Histology and Immunohistochemistry in the Rat Bleomycin Model. Sprague-Dawley rats were administered bleomycin for 14 days. Rats were intubated and aerosolized with 200 µl of saline or 1.0 unit of bleomycin per rat (three to four rats per group). One day after bleomycin challenge rats were treated twice daily with vehicle or vehicle plus SD-208 (60 mg/kg in 1% methyl cellulose) or SD-282 (60 mg/kg in 1% PEG-400). Inhibitor doses were chosen based on efficacious doses from our previous studies (Li et al., 2004
; Bonniaud et al., 2005
). In addition, the inhibitor doses used in this study have been shown to have pharmacological effects in the lungs of bleomycin-challenged rats as demonstrated by the inhibition of CTGF mRNA by SD-208 and of COX2 mRNA by SD-282 (data not shown). Lungs were removed en bloc; they were inflated with 4% formalin at a constant pressure of 15 cm of water and then fixed in 10% formalin for 48 h. The left lung was cut perpendicular to the tracheobronchial tree into sections. Tissue sections were processed, embedded in paraffin, cut into 5-µm sections, and immunohistochemically stained using mouse antibodies against
-smooth muscle actin (Chemicon International, Inc., Temecula, CA). Negative control sections were run in parallel with normal mouse IgG2
diluted to the same concentration as the primary antibody (data not shown). The number of myofibroblasts was measured under the Nikon E600 light microscope equipped with a Spot digital camera at magnification of 400x for 36 to 40 fields (for each animal). Positively stained smooth muscle cells surrounding major airways and blood vessels were excluded from the analysis.
Measurement of Hydroxyproline Content. To quantify lung collagen content as an indicator of pulmonary fibrosis, the hydroxyproline content in whole lungs was measured in all animals (seven to eight animals per group) according to published methods (Woessner, 1961
). In brief, lung samples were minced into fine pieces with a scissors and homogenized thoroughly in 15 ml of 1x PBS with a Polytron homogenizer (Kinematica, Basel, Switzerland). One milliliter of whole homogenate was precipitated with 0.25 ml of ice-cold 50% (w/v) trichloroacetic acid. The precipitate was hydrolyzed in 2.0 ml of 6 N HCL for 18 h at 110°C. Hydroxyproline content was determined after neutralization. The results were calculated as micrograms of hydroxyproline per whole lung using hydroxyproline standards from Sigma (St. Louis, MO).
cDNA Microarray. Gene expression profiles were determined from cDNA microarrays as described previously (Kapoun et al., 2004
). In brief, arrays containing 8600 elements were derived from clones isolated from normalized cDNA libraries or purchased from ResGen (Invitrogen). Clones were sequence verified, and differentially expressed genes were reconfirmed by NCBI BLAST analyses. Differential expression values were expressed as the ratio of the median of background-subtracted fluorescent intensity of the experimental RNA to the median of background-subtracted fluorescent intensity of the control RNA. For ratios greater than or equal to 1.0, the ratio was expressed as a positive value. For ratios less than 1.0, the ratio was expressed as the negative reciprocal (e.g., a ratio of 0.5 =-2.0). Differential expression ratios were determined as the mean of the two values from dye-swapped duplicates. Expression data were rejected if neither channel produced a signal of at least 2.0-fold over background. Statistically significant differential expression threshold values were determined according to the method of Yang et al. (2002
). Hierarchical clustering was used to visualize the data and to group genes into similar expression patterns (Spotfire, Somerville, MA). The data were prepared for clustering by using the log base 10 of the median expression values and then normalized by the Z-score method within Spotfire.
mRNA Isolation, Labeling, and Hybridizations. Total RNA was extracted from cells using QIAGEN's RNeasy kit (Valencia, CA). RNA was amplified using a modified Eberwine protocol (Kapoun et al., 2004
) that incorporated a poly(A) tail into the amplified RNA. Fluorescently labeled cDNA probes were generated by reverse transcription of 4 µg of RNA with SuperScript II (Invitrogen) using anchored dT primers in the presence of Cy3 or Cy5 dUTP as described previously (Kapoun et al., 2004
). Hybridization of each fluorophore was quantified using an Axon GenePix 4000A scanner.
Real-Time RT-PCR. Real-time RT-PCR was performed in a twostep manner. cDNA synthesis and real-time detection were carried out in a PTC-100 Thermal Cycler (MJ Research Inc., Waltham, MA) and an ABI Prism 7900 Sequence Detection System (Applied Biosystems, Foster City, CA), respectively. Random hexamers (QIAGEN) were used to generate cDNA from 200 ng of RNA as described in Applied Biosystems User Bulletin 2. TaqMan PCR Core Reagent Kit or TaqMan Universal PCR Master Mix (Applied Biosystems) were used in subsequent PCR reactions according to the manufacturer's protocols. Relative quantitation of gene expression was performed using the relative standard curve method.
Sequence specific primers and probes were designed using Primer Express software (ver. 2; Applied Biosystems). Sequences of primers and probes can be found in Supplemental Table E1. Expression levels were normalized to 18 S rRNA. All real-time RT-PCR reactions were performed in triplicate on each of the three biological replicates from each donor.
Statistical Analysis. The experiments were usually performed 3 to 4 times with similar results. Significance was tested by one- or two-tailed analysis of variance followed by Bonferroni's correction using PRISM4 software (GraphPad Software Inc. San Diego, CA) unless otherwise indicated.
| Results |
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RI Kinase Inhibitor SD-208 Blocks SMAD Signaling in HLF Cells
RI and p38 MAPK. SD-208 has an IC50 of 49 nM based on direct enzymatic assay of TGF
RI kinase activity with specificity of at least >17-fold over members of a panel of related protein kinases (Table 1). SD-282 is a small molecule, ATP-competitive, specific inhibitor of p38
and p38
MAP kinase, and demonstrates 14-fold selectivity for p38
versus p38
MAP kinase (IC50, 1.6 and 23 nM, respectively; Table 2).
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As SMAD phosphorylation and nuclear translocation are well characterized steps in TGF
signaling, we tested the ability of pharmacological inhibitors of TGF
RI kinase and p38 MAPK to modulate these events. HLF cells were treated with TGF
for 30 min in the presence of either a small molecule inhibitor of TGF
RI (SD-208) or of p38 MAP kinase (SD-282) for 30 min.
ELISA and Western blot analysis showed that SD-208, but not SD-282, inhibited TGF
-induced SMAD2/3 and SMAD2 phosphorylation, respectively, in a dose-dependent manner (0-400 nM; Fig. 2). In addition, SD-208 blocked TGF
-induced nuclear translocation of SMAD2 in HLF cells; however, SD-282 had no effect (Fig. 3). These results show that SD-208 is an effective inhibitor of TGF
-induced SMAD signaling and suggest that p38 has no direct role in SMAD-mediated signaling during myofibroblast differentiation.
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RI Kinase Inhibitor SD-208 Inhibits Myofibroblast Differentiation and Collagen Gel Contraction in HLF Cells
-induced myofibroblast transformation and collagen gel contraction. Protein levels of
-smooth muscle actin expressed by myofibroblasts were measured from HLF cells treated for 24 and 72 h with TGF
. Treatment with TGF
resulted in increased levels of
-smooth muscle actin; cotreatment with SD-208 showed a >80% reduction in
-smooth muscle actin levels compared with TGF
treatment alone at 24 and 72 h (Fig. 4). In contrast, SD-282 had no significant effect on TGF
-induced
-smooth muscle actin. Similar effects were also seen in the absence of TGF
stimulation, showing that SD-208 also inhibits basal levels of
-smooth muscle actin.
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was added to collagen gels containing HLF cells in the presence or absence of SD-208 and SD-282. Treatment of fibroblasts with TGF
increased the contraction of collagen gels mediated by HLF cells (Fig. 5). The addition of SD-208, but not SD-282, significantly inhibited this gel contraction in a dose-dependent manner. Together, these data demonstrate that TGF
RI kinase inhibition, but not p38 MAPK inhibition, effectively blocks the fibrogenic properties of TGF
in human lung fibroblasts.
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RI Kinase Inhibitor SD-208 Inhibits Myofibroblast Differentiation and Collagen Deposition in Vivo in Bleomycin-Treated Rat Lungs
-smooth muscle actin immunohistochemistry in a rodent model of pulmonary fibrosis to compare our in vitro observations of the effects of TGF
RI and p38 blockades on myofibroblast conversion to an in vivo system. Bleomycin induces acute lung injury followed by chronic fibrosis in a dose-dependent manner in both humans and in experimental animals. In this study, we tested the effects of SD-208 and SD-282 in a rat model of bleomycin induced fibrosis (Thrall et al., 1979
is thought to be a critical mediator of pathogenesis. Rats were treated with vehicle, SD-208 (60 mg/kg/orally twice daily), or SD-282 (60 mg/kg/orally twice daily) 1 day after bleomycin administration and continued for 14 days.
Saline-treated rats stained positive for
-smooth muscle actin around major airways and blood vessels, whereas bleomycin-treated animals had significantly higher numbers of myofibroblasts (
-smooth muscle actin-positive cells) at the fibroblastic foci (Fig. 6). SD-208, but not SD-282, significantly reduced the number of cells staining positive for
-smooth muscle actin (Fig. 6). In a repeat experiment, lung hydroxyproline content was measured in SD-208-treated animals compared with vehicle control (Fig. 7). Hydroxyproline content is a well characterized assessment of the amount of fibrosis in tissues (Woessner, 1961
). Bleomycin-treated rats that were dosed with 60 mg/kg SD-208 showed a significant decrease in the total hydroxyproline per lung compared with the 1% methyl cellulose control (***, p < 0.001). These results demonstrate that TGF
-receptor blockade, but not p38 inhibition, attenuates myofibroblast conversion and collagen deposition in an in vivo model of pulmonary fibrosis.
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TGF
RI Kinase Blockade Affects a Majority of TGF
-Responsive Genes in HLF Cells
We employed SD-208 and SD-282 together with cDNA microarray analysis to dissect the molecular signaling events downstream of the TGF
pathway. Using these compounds, we tested the ability of each compound to affect TGF
-regulated gene expression profiles in treated HLF cells at various times. A time course was performed to comprehensively investigate the range of TGF
response genes, including the acute early gene changes as well as the later TGF
events. Fluorescently labeled cDNAs were generated from four experimental groups at multiple time points (1, 7.5, 24, and 72 h): unstimulated cells (control), TGF
-treated cells, TGF
- and SD-208-treated cells, and TGF
- and SD-282-treated cells. The following hybridizations were performed in duplicate: control versus TGF
, TGF
versus TGF
and SD-208, and TGF
versus TGF
and SD-282. The 1-h samples were omitted from the inhibitor analysis, because TGF
affected a small number of genes. As a result, this time point would not contribute significantly to a functional analysis of inhibitor-affected genes.
A time course of TGF
-responsive genes was identified (Fig. 8A). In terms of the number of genes affected by TGF
, maximum changes were observed at 24 h (640 up- and 898 down-regulated). SD-208 had significant effects on gene expression induced by TGF
; at 7.5, 24, and 72 h, the percentage of effected genes was 77, 84, and 58%, respectively (Fig. 8B). In contrast, at these time points, SD-282 inhibited between 10 and 18% of TGF
-regulated genes (Fig. 8B). Most genes inhibited by SD-282 are also affected by SD-208 (Fig. 8C), consistent with the expectation that the blockade of the TGF
RI signaling affects the p38 MAPK pathway in TGF
-simulated cells.
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RI, has striking affects on TGF
-regulated gene expression. In contrast, p38 kinase inhibition opposed relatively few TGF
-induced gene changes, suggesting that the p38 component of the TGF
signaling pathway is relatively modest in human lung fibroblasts.
Gene Expression Clustering
Genes were grouped according to functional categories by using a combination of gene expression clustering and functional annotations (Fig. 9).
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Fibrosis and Extracellular Matrix Genes. A cluster of genes involved in fibrosis and extracellular matrix (ECM) deposition were regulated in response to TGF
(Fig. 9A). A majority of these genes were up-regulated by TGF
. Representative examples include CTGF, fibronectin, PAI-1, TIMP3, THBS2, and several members of the Collagen gene family. All of these TGF
-stimulated gene events were reversed by SD-208. SD-282 also showed a modest reversal of some of the genes in this cluster, such as COMP (cartilage oligomeric matrix protein), TIMP3, and IL11. These results show that SD-208 globally opposed TGF
induced fibrotic gene expression in human lung fibroblasts, whereas SD-282 affected only a subset of the fibrogenic genes.
Inflammation Genes. Genes involved in inflammatory processes were elevated and repressed by TGF
in HLF cells (Fig. 9B). TGF
stimulated pro-inflammatory genes including COX2, COX1, IL6, interleukin 1 receptor accessory protein (IL1RAP), bradykinin receptor B2 (BDKRB2), tumor necrosis factor,
-induced protein 6 (TNFAIP6), and TNF superfamily member 4 (TNFSF4). At the same time, TGF
also downregulated pro-inflammatory genes such as CCL13 (MCP-4), CXCL7 (MCP-3), CCL8 (MCP-2), and CXCL1 (GRO1). The effects of TGF
on these genes increased over time; repression by TGF
was not seen until 24 h (
4-6-fold) whereas by 72 h, the down-regulation increased to 8- to 11-fold. The TGF
effects on all these gene regulatory events were opposed by SD-208. It is noteworthy that
30% of the TGF
-regulated inflammatory genes were also reversed by SD-282. The genes, which are reversed by both inhibitors, include COX2, IL1RAP, TNFAIP6, and TNFSF4. Together, these data suggest that SD-208 and SD-282 attenuate TGF
-induced pro-inflammatory gene responses in human lung fibroblasts.
Cytoskeletal Genes. A group of cytoskeletal genes was found to be regulated by TGF
(Fig. 9C). A majority of these genes are up-regulated by TGF
. Representative genes from this cluster include known markers of myofibroblasts such as
-smooth muscle actin 2 (ACTA2),
-skeletal muscle actin 1 (ACTA1), and nonmuscle myosin heavy chain 9 (MYH9). Many of the genes in this group are novel TGF
-responsive genes. For example, TGF
up-regulated dystrophin (DMD). DMD is involved in muscle contraction, which is an additional property that myofibroblasts acquire. SD-208, the TGF
RI inhibitor, but not SD-282, the p38 MAPK inhibitor, opposed a majority of the TGF
-induced cytoskeletal gene changes in this cluster. This result is consistent with the
-smooth muscle actin Western data showing that SD-208 blocks the transformation of fibroblasts to myofibroblasts. Furthermore, the temporal induction patterns of genes contributing to myofibroblast differentiation and contraction were up-regulated between 7.5 and 24 h, consistent with our observation by Western analysis that
-smooth muscle actin expression becomes detectable after treatment of fibroblasts with TGF
by 24 h.
Cell Proliferation Genes. TGF
regulated a cluster of genes involved in cell proliferation (Fig. 9D). We found upregulation of several genes, including CYR6 (IGFBP10), FGF2, IGF1, IGFBP7, PDGFA, and PTHLH. The induction of these genes was suppressed by SD-208, but not by SD-282. In addition, down-regulation of several antiproliferative genes, such as BTG1, CD164, and GAS1, was observed. The regulation of these genes was strongly suppressed by SD-208, and not by SD-282, except for GAS1, which showed modest reversal by SD-282. These data support a role for TGF
in the positive regulation of cell proliferation in human lung fibroblasts after conversion to myofibroblasts in response to ligand-mediated signaling through TGF
RI.
Apoptosis and Cell Survival Genes. TGF
up-regulated antiapoptotic genes, including BAG3, BNIP1, DAD1, and IER3 (Fig. 9E). In addition, TGF
down-regulated numerous proapoptotic genes, including CASP5, CED-6, CRADD, DAP, DAPK2, HTATIP2, PLAGL1, REQ, STK17A, TIA1, TFPT, and TNFSF10. All of these gene regulatory events were reversed by SD-208, whereas a subset, DAP, REQ, TNFSF10, and STK17B, was affected also by SD-282. These results suggest that TGF
may protect myofibroblasts from apoptosis in human lung fibroblasts, and that TGF
receptor blockage relieves this protection.
TGF
and MAPK Pathway Genes. TGF
was also found to regulate genes within the TGF
and MAPK pathways (Fig. 9F and Supplemental Table E2). A majority of the genes were down-regulated by TGF
, such as MADH1 (mothers against DPP homolog 1 or SMAD1), TGFBR3 (
-glycan), MAP2K6 (MEK6), MAP3K5 (MEKK5), MAP4K4 (HGK), and MAPKAPK3 (3PK). We also observed TGF
repression of SMAD3 (Table 3 and data not shownone replicate at the 72 h TGF
+ SD-282 time point did not meet acceptable criteria as described under Materials and Methods). A few genes were up-regulated, including SKIL (SNO), MADH7 (SMAD7), and MAPK7 (ERK5). All TGF
-induced gene expression changes in this group were reversed by SD-208. It is noteworthy that SD-282, the p38 MAPK inhibitor, also blocked TGF
-down-regulation of MEK6 and MEKK5, which activate p38 and c-Jun NH2-terminal kinase MAP kinases, respectively. Many of these gene changes represent novel TGF
-induced events, such as the regulation of SNO, HGK, and 3PK. These results are consistent with ligand-induced feedback loops, which serve to regulate signaling mediated by SMADs and p38 MAPK.
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Validation of Microarray by Real-Time RT-PCR and Western Analyses
Representative microarray data were validated in multiple HLF donors using real-time RT-PCR and Western analyses. The effects of TGF
treatment and cotreatment with SD-208 or SD-282 were similar as measured by real-time RT-PCR and microarray for the tested genes: ACTA2, TIMP3, CTGF, IL11, PAI-1, COX2, IL6, SMAD3, SMAD7, IER3, PDGFA, fibronectin, and IGF1 (Table 3, three separate donors). SD-208 reversed the TGF
effects of these genes, whereas SD-282 showed effects only on a subset of genes, including TIMP3, IL11, COX2, and fibronectin. Some differences between the microarray and real-time RT-PCR were noted for fibronectin. TGF
-induction of fibronectin was inhibited similarly by SD-208 using these two methods, whereas partial inhibition by SD-282 was not detected by the differential expression threshold values of the microarray. Further validation of gene expression changes was observed at the protein level in two separate donors for CTGF, PAI-1, and
-smooth muscle actin (Figs. 4 and 10, representative donor shown). Taken together, these results confirmed our microarray data using independent assay methods.
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| Discussion |
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RI, but not of p38 MAPK, blocked myofibroblast transformation in human lung fibroblasts and in an in vivo model of pulmonary fibrosis. The TGF
RI inhibitor, SD-208, also reduced collagen deposition in a rat bleomycin model, suggesting that SD-208 attenuates fibrosis in this model. Furthermore, blockade of TGF
RI, but not p38 MAPK, inhibited collagen gel contractiona functional consequence of myofibroblast transformation. We also used cDNA microarray analysis to gain a better understanding of the molecular mechanisms downstream of TGF
RI signaling as they relate to myofibroblast conversion in human lung fibroblasts.
Microarray analyses demonstrated that inhibition of TGF
RI kinase activity by SD-208 opposed a majority (58-84%) of the TGF
-induced gene expression changes from 7.5 to 72 h. In contrast, blockade of the p38 MAPK pathway by SD-282 affected a minor subset (10-18%) of these TGF
mediated events during the same time course. TGF
RI receptor blockade opposed TGF
-regulated genes involved in fibrosis, myofibroblast transformation, cell proliferation, inflammation, and apoptosis. Inhibition of p38 MAPK demonstrated that a subset of the TGF
-regulated events involved in inflammation and in fibrosis were mediated at least in part by p38.
Fibroblasts undergo transformation to myofibroblasts in response to TGF
(Yokozeki et al., 1997
). These smooth muscle-like cells are instrumental in growth, development, and repair of normal and diseased tissues. During normal wound repair, myofibroblast transformation and expression of ECM proteins are initiated in response to injury but terminate after healing when myofibroblasts disappear by apoptotic mechanisms (Desmouliere et al., 1995
). In contrast, in fibrotic diseases such as pulmonary fibrosis, myofibroblasts persist, as evidenced by fibroblastic foci in diseased lungs (Nicholson et al., 2002
), with continued proliferation and ECM expression. This dysregulated state is sustained by the expression of profibrotic and proinflammatory factors, including TGF
, which act to prevent apoptosis and support continued expression of the factors by the myofibroblasts.
In the present study, we show that the process of myofibroblast transformation in human lung fibroblasts is dependent on signaling through the TGF
RI and not the p38 pathway. The effects of inhibition of these pathways as they relate to myofibroblast conversion were measured by three independent methods:
-smooth muscle actin protein staining, microarray gene expression of cytoskeletal and muscle contraction genes, and collagen gel contraction. Collagen gel contraction assays are accepted as functionally relevant as models of fibrotic tissue remodeling because contraction induced by TGF
during wound healing is thought to depend, in part, on the promotion of myofibroblast differentiation (Lijnen et al., 2003a
,b
). We identified additional known markers (Manabe et al., 2002
) of the conversion to myofibroblasts including MYH9, tropomyosin 1, and tropomyosin 4 through microarray analysis (Supplemental Table E2 and data not shown). Further supporting the transformation to the bona fide myofibroblast, we found several newly identified TGF
-responsive genes that are involved in muscle contraction, such as caldesmon 1, calponin 1, calponin 3, dystrophin, and troponin C (Supplemental Table E2 and data not shown). Induction of these genes by TGF
was reversed by SD-208 and not SD-282. The observation that the p38 path-way is not involved in myofibroblast conversion is consistent with previous reports (Hashimoto et al., 2001
; Horowitz et al., 2004
). Taken together, these data corroborate the role of TGF
in myofibroblast conversion and show that SD-208 attenuates this fibrogenic process.
After activation of the myofibroblast by TGF
, growth factors such as platelet-derived growth factor and CTGF, a member of the platelet-derived growth factor family, are thought to be responsible for myofibroblast proliferation (Powell et al., 1999
). In the current study, we demonstrate that TGF
induced the expression of PDGFA and CTGF, as well as several other growth factor genes (IGFBP10, FGF2, IGF1, and IGFBP7) implicated in cell proliferation. Moreover, we found that TGF
down-regulated several novel responsive genes (BTG1, CD164, and GAS1) involved in anti-proliferative activities, further supporting its role in promoting myofibroblast proliferation. These TGF
-regulated events were not affected by p38 inhibition but were opposed by SD-208. Thus, TGF
's role in myofibroblast proliferation is two-fold: induction of proliferative growth factors and suppression of genes that normally act to inhibit cell proliferation; both of these actions were effectively blocked by SD-208.
There is extensive literature implicating myofibroblasts as key sources of fibrotic gene expression and production of ECM. Although not fully investigated, recent data suggest that bone marrow derived progenitor cells in the lung may also be an important source of collagen production in pulmonary fibrosis (Hashimoto et al., 2004
). Here, we show that in HLF cells, TGF
induced the expression of
20 genes involved in fibrogenic processes. Furthermore, we show that SD-208 globally opposes these fibrogenic gene changes. We found that a subset of the fibrotic genes (TIMP3, IL11, fibronectin) in myofibroblasts was regulated by both the TGF
and p38 pathways. In most cases, the suppressive effects of SD-282 were modest compared with SD-208, suggesting that in a fibrogenic context, p38 pathway mediated events through TGF
RI represent only partial signaling.
Myofibroblasts also play a major role in inflammatory responses (Phan et al., 1999
). In the present study, we show that some of these effects are mediated by p38 signaling. We report for the first time that TGF
up-regulation of several pro-inflammatory genes (IL1RAP, TNFAIP6, and TNFSF4) in HLF cells is mediated by the p38 pathway. We also observed that TGF
induction of COX2, which is mediated in part by IL1RAP, is also opposed by SD-208 and SD-282. IL1RAP, interleukin 1 receptor accessory protein, forms a complex at the cell membrane with IL1 and its receptor, which is necessary for IL1 signal transduction. IL1 can mediate the induction of COX2 in intestinal fibroblasts (Mifflin et al., 2002
) and the production of PGE2 in lung fibroblasts (Skold et al., 2000
). Furthermore, we found that TGF
downregulated several pro-inflammatory genes, such as MCP-4, MCP-3, MCP-2, and GRO1, consistent with previous reports showing that TGF
plays a dual role in inflammatory processes (Kitamura, 1997
; Gerritsma et al., 1998
; Fong et al., 2000
; Bradbury et al., 2002
). It is noteworthy that the downregulation of these genes increased over time. These results raise the possibility that TGF
may have a role in the resolution of the inflammatory phase of the myofibroblast. Other genes relating to inflammatory processes that are down-regulated by TGF
include several members of the steroid receptor family (NR3C1/glucocorticoid receptor, NR2C1, NR2F1, and NR2F2) (Table E2). The down-regulation of these genes is relieved by TGF
RI receptor blockade but not by p38 inhibition. Together, our results suggest that both TGF
-induced SMAD signaling and p38 MAPK signaling are important in inflammatory responses in human lung fibroblasts. Moreover, the novel observation that effects of TGF
RI blockade on steroid receptor genes raise the possibility that TGF
RI inhibitors may be useful for increasing the efficacy of corticosteroids in inflammatory diseases such as asthma.
Successful wound repair mandates a process of myofibroblast elimination. This usually occurs after the proliferative and inflammatory phases subside. The mechanism of this resolution involves apoptosis (Desmouliere et al., 1995
); however, the apoptotic process in the context of TGF
signaling in myofibroblasts is not completely understood. Here, we show that TGF
regulated numerous apoptotic genes; TGF
up-regulated antiapoptotic genes and down-regulated proapoptotic genes. These gene groups also revealed several novel TGF
-responsive genes such as CED-6, CRADD, DAP, DAPK2, HTATIP2, PLAGL1, REQ, and STK17A. In the context of extended TGF
signaling, the gene changes suggest that TGF
may serve to protect myofibroblasts from apoptosis. These data are consistent with a previous report showing that TGF
protects myofibroblasts against IL-1
-induced apoptosis (Zhang and Phan, 1999
). SD-208 reversed the TGF
-induced regulation of these apoptotic genes. The finding supports the notion that TGF
-induced protection from apoptosis in human lung fibroblasts can be attenuated by TGF
RI blockade and provides a rational for treating wounds susceptible to excessive scaring with inhibitors of TGF
RI.
In summary, our study demonstrates that SD-208, the TGF
RI inhibitor, but not SD-282, the p38 MAPK inhibitor, attenuated TGF
-induced SMAD signaling and myofibroblast transformation in vivo and in vitro. Microarray analysis identified molecular fingerprints underlying these processes, and showed that SD-208 had global effects on reversing TGF
-induced genes involved in fibrosis, inflammation, cell proliferation, cytoskeletal organization, and apoptosis. These studies also revealed that although the p38 pathway may not be needed for appearance or disappearance of the myofibroblast, it can mediate a subset of inflammatory and fibrogenic events of the myofibroblast during the process of tissue repair and fibrosis. Importantly, our studies support a therapeutic role for TGF
RI inhibition in human interstitial lung diseases and support the use of inhibitors such as SD-208 for treating fibrotic conditions.
| Acknowledgements |
|---|
| Footnotes |
|---|
ABBREVIATIONS: ECM, extracellular matrix; TGF
, transforming growth factor-
; TGF
R, transforming growth factor-
receptor; MAPK, p38 mitogen-activated kinase; HLF, human lung fibroblast; RT-PCR, reverse transcription-polymerase chain reaction; ELISA, enzyme-linked immunosorbent assay; FGM, fibroblast growth medium; BSA, bovine serum albumin; SMAD, mothers against DPP homolog; CTGF, connective tissue growth factor; PAI-1, plasminogen activator inhibitor, type I; GAPDH, glyceraldehyde-3-phosphate dehydrogenase; PBS, phosphate-buffered saline; DMEM, Dulbecco's modified Eagle's medium; PEG, polyethylene glycol.
The online version of this article (available at http://molpharm.aspetjournals.org) contains supplemental material. ![]()
Address correspondence to: Dr. Ann M. Kapoun, 6500 Paseo Padre Park-way, Fremont, CA 94555. E-mail: ann_kapoun{at}yahoo.com
| References |
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