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Department of Cellular and Molecular Physiology, The Penn State Milton S. Hershey College of Medicine, Hershey, Pennsylvania (B.Z.P.); and Department of Pharmacology, University of Washington, Seattle, Washington (W.A.C.)
Received November 11, 2005; accepted May 4, 2006
| Abstract |
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1,
,
, and
2/
subunits. The
1 subunit is the pore-forming subunit and contains the key structural determinants required for gating, drug binding, and ion permeation (Fig. 1A). Ca2+ channels of the CaV1 subfamily conduct L-type Ca2+ currents and are the target proteins for a number of drugs, including the dihydropyridines (DHPs). DHPs are allosteric modulators of channel gating and may act as either agonists favoring an open state (Brown et al., 1984
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1 subunit, the resulting channel becomes sensitive to both DHP agonists and antagonists (Hockerman et al., 1997
The Ca2+ channel pore contains a Ca2+ binding site consisting of one negatively charged glutamate residue from each domain, which collectively form the selectivity filter (Fig. 1). The selectivity filter is thought to consist of a negatively charged locus capable of binding a single Ca2+ with high affinity or two Ca2+ ions with low affinity (Hille, 2001
; Sather and McCleskey, 2003
). In the absence of divalent cations, Ca2+ channels are highly permeable to monovalent cations. Under such conditions, Ca2+ functions as a channel blocker with an IC50 in the submicromolar range. Monovalent currents are blocked by Ca2+ ions because monovalent cations are unable to dislodge tightly bound Ca2+ ions from the selectivity filter. Currents carried by Ca2+ ions occur when Ca2+ is raised to the millimolar range because repulsive forces from a second Ca2+ ion entering the pore increase the exit rate of the bound Ca2+ ion by more than 10,000-fold at physiological Ca2+ concentrations (Almers and McCleskey, 1984
; Hess and Tsien, 1984
; Yue and Marban, 1990
). The original two-site barrier model nicely simulates most of the permeation properties of the channel, but it has limited value when applied to structural studies. However, the primary features of this model (i.e., binding and repulsion) almost certainly are dominant forces in a conducting pore. Binding and repulsion of ions within the selectivity filter are core features of recent models of the pore that are based more on structure than the original two-site models (Dang and McCleskey, 1998
; Nonner et al., 1998
; Boda et al., 2001
; Corry et al., 2001
; Lipkind and Fozzard, 2001
).
We and others have found that high-affinity DHP binding is dependent on Ca2+ binding to the selectivity filter (Mitterdorfer et al., 1995
; Peterson and Catterall, 1995
). These findings establish an important link between DHP binding to its receptor site deep within the lipid bilayer and Ca2+ binding to the selectivity filter in the outer pore. This relationship offers a unique opportunity to gain a deeper understanding of the molecular basis for DHP action, ion permeation, and gating. We have systematically characterized the DHP and Ca2+ binding characteristics of mutant Ca2+ channels whose pore-forming glutamate residues have been replaced by glutamine or lysine. We analyzed these mutants using an allosteric binding model that enabled us to determine 1) the actual dissociation constants for Ca2+ binding to the selectivity filter at any DHP concentration, 2) the dissociation constant for DHP binding at any Ca2+ concentration, and 3) the magnitude of two allosteric factors that couple DHP and Ca2+ binding. We found that all four of the glutamate residues that form the ion selectivity filter are important for DHP and Ca2+ binding. Mutational analysis of several non-glutamate residues in the outer pore revealed altered DHP and Ca2+ sensitivity as well. Thermodynamic mutant cycle analysis (Carter et al., 1984
; Hidalgo and MacKinnon, 1995
) of two of these mutants, F1013G and Y1021K, indicate that Phe-1013 and Tyr-1021 are energetically coupled when a single Ca2+ ion is bound in the selectivity filter, suggesting that DHP binding promotes structural rearrangements in the outer pore that involve the energetic coupling of Phe-1013 and Tyr-1021 via a single bound Ca2+ ion. We discuss our findings in the context of current theoretical and structural models for permeation (Nonner et al., 1998
; Boda et al., 2001
; Corry et al., 2001
; Lipkind and Fozzard, 2001
; Wang et al., 2005
) and propose that DHPs block monovalent and divalent currents by stabilizing a nonconducting blocked state that is structurally and functionally analogous to a channel with a single Ca2+ ion in its selectivity filter.
| Materials and Methods |
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1S (CaV1.1) Ca2+ channels were coexpressed with the
1a and
2
subunits as described previously (Peterson and Catterall, 1995Radioligand Binding. Saturation binding assays were performed in buffer A using 20 to 100 µg of membrane protein, 0.1 to 10 nM (+)-[3H]PN200-110 (PerkinElmer Life and Analytical Sciences, Boston, MA), and the indicated concentrations of free Ca2+ for 120 min at 22°C. Nonspecific binding was determined by the addition of 1 µM(±)-PN200-110, thus reducing kon for the radiolabeled ligand to an insignificant level, and bound radioligand was recovered by vacuum filtration using GF/C glass fiber filters.
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Data Analysis. DHP binding as a function of Ca2+ concentration was fit using an allosteric binding model (Fig. 2B, Scheme 1) described in the text with the aid of the analysis and graphics programs Excel (Microsoft, Redmond, WA) and Origin (OriginLab Corp., Northampton, MA). The statistical significance of the observed differences between the binding parameters of wild-type and mutant channels was evaluated using a two-tailed Student's t test and analysis of variance (Fig. 3). Data are means ± S.E.M., and statistical significance was set at P < 0.05 (*).
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| Results |
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and
, have been introduced that couple DHP and Ca2+ binding. Using this revised version of Scheme 1 (Fig. 2B), we are now able to quantitatively assess the binding affinity for Ca2+ to the channel and the cooperativity between the Ca2+ and DHP receptor sites. It turns out that
, which was absent in the original model, is altered in several of the most interesting mutant channels assessed in these studies (see below).
Figure 2B, Scheme 1, is thermodynamically constrained such that the ratio of dissociation constants for DHP binding in the absence and presence of Ca2+ must equal to the ratio of the dissociation constants for Ca2+ binding in the absence and presence of DHP. Therefore, the individual dissociation constants for DHP and Ca2+ binding are completely determined by KD1, the dissociation constant for DHP binding to a channel whose selectivity filter is occupied by a single Ca2+ ion, and KC1, the dissociation constant for Ca2+ binding to DHP-occupied Ca2+ channels, respectively, and the allosteric factors
and
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Ca2+ Binding to the Outer Pore Is Allosterically Coupled to DHP Binding. The pore segments from each domain of DHP-sensitive (CaV1.1-4) and -insensitive (CaV2.1-3) Ca2+ channels are aligned in Fig. 1B. To determine whether Ca2+ binding to the pore is allosterically coupled to DHP binding, each of the negatively charged glutamate residues that collectively form the selectivity filter (Fig. 1B, boxes) was replaced by a neutral glutamine or a positively charged lysine residue, generating the mutants E292Q, E614Q, E1014Q, E1323Q, E292K, E614K, E1014K, and E1323K. E614K and E1323K exhibited no DHP binding and were not studied further. KD1 for each mutant was determined by saturation binding in the presence of 1 mM free Ca2+ and increasing concentrations of (+)-PN200-110. KD1 values for wild-type and each of the mutant channels are summarized in Fig. 3A and Table 1. The sensitivity of the wild-type and mutant channels to Ca2+ was determined by incubating membranes in a concentration of (+)-PN200-110 equal to the measured KD1 value for that particular channel (resulting in an occupancy of 0.5) plus increasing concentrations of free Ca2+, as described under Materials and Methods. KC1 and
were determined by fitting these data using Fig. 2B, Scheme 1, with KD1 and free (+)-PN200-110 serving as fixed parameters. KD1, KC1, and
for wild-type and each mutant channel are summarized in Fig. 3 and Table 1.
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DHP binding, the sensitivity of DHP binding to Ca2+, and the coupling factor
are altered for the mutant channels. The values determined for KD1 are increased 5.5- to 10-fold by these mutations (Fig. 3A; Table 1). Although the four glutamate residues are not contiguously localized on the primary sequence, each functions as an important DHP binding determinant in the presence of Ca2+, suggesting that the selectivity filter acts as a unified locus that modulates DHP binding. Alteration of the four glutamate residues affects KD1, KC1, and
to different extents. These differences indicate that the binding site for Ca2+ ions is asymmetrical, as is the coupling of each glutamate residue to DHP binding (Fig. 3).
As expected for mutant channels with amino acid substitutions in their selectivity filters, dramatic changes in KC1 were observed (Fig. 3B). The smallest change in KC1 was observed with E292Q, whose binding of Ca2+ is reduced by less than 12-fold. KC1 for the other glutamate mutants was increased by 90- to 150-fold.
The allosteric coupling factor
, which reflects the effect of binding of one Ca2+ ion on DHP affinity, was reduced from 15.5 for wild type to values ranging from 1.3 to 9.8 for the glutamate substitution mutants (Fig. 3C). E292Q, whose value for
was increased to 54.5, was the only exception to this trend. The role
plays in determining DHP binding properties is discussed in greater detail below. Together, the changes in KD1, KC1, and
in these mutants indicate that the DHP receptor site is allosterically coupled to the selectivity filter of L-type Ca2+ channels. Therefore, it is plausible that the molecular details that underlie DHP activity may involve structural rearrangements in the outer pore and selectivity filter of the channel.
Uncharged Residues in the Outer Pore Are Critical for DHP and Ca2+ Binding. A comparison of the amino acid sequences in the outer pore segments of each repeat of the Ca2+ channel isoforms reveals several residues that are unique to DHP-sensitive channels and are adjacent to the Ca2+ binding glutamate residues in the selectivity filter (Fig. 1B). To determine whether these residues are important DHP- and/or Ca2+ binding determinants, the mutants C288A, F1013G, Q1018E, Q1018M, Y1021K, C1319A, Q1326H, and E1327Q were constructed and analyzed as described above and under Materials and Methods (Fig. 4; Table 2). C288A, Q1018E, Q1018M, C1319A, Q1326H, and E1327Q have DHP and Ca2+ binding profiles similar to those of wild type and are not discussed further.
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In contrast to the glutamate mutants, high-affinity binding of DHP and Ca2+ is enhanced for mutant F1013G, in which a glycine conserved in all CaV2 channels is substituted for a phenylalanine residue that is present in all CaV1.1 channels. KD1 for F1013G is slightly lower than that of wild type (0.22 verses 0.31 nM, respectively), and KC1 for F1013G decreased 2.3-fold from 40 to 17.4 nM (Fig. 4, A and B). However, the most interesting change in the binding profile for F1014G is the 12.5-fold increase in magnitude of the coupling factor
which results in an 11-fold increase in
KD1 compared with wild type (Fig. 4C).
High-affinity binding of DHP and Ca2+ is also modified for mutant Y1021K, in which a lysine residue found in CaV2.1 and CaV2.2 channels is substituted for a tyrosine residue found in all CaV1.1 channels (Fig. 4). First, in contrast to F1013G, KD1 for Y1021K is 3-fold larger than KD1 for wild type (Fig. 4A; Table 2). Second, KC1 for Y1021K is more than 30-fold larger than KC1 for wild type (Fig. 4B). Finally, although the coupling factor
for F1013G is 12.5-fold larger than that of wild type,
for Y1021K is only one-half that of wild type (Fig. 4C).
The results with F1013G and Y1021K indicate that non-glutamate residues in the outer pore loop function as important binding determinants for DHPs and Ca2+ ions. The qualitative differences in the effects of these mutations on ligand binding suggest that the roles Phe-1013 and Tyr-1021 play in DHP and Ca2+ binding are distinct.
Ca2+ Promotes Energetic Coupling between Phe-1013 and Tyr-1021. Qualitatively divergent effects of Ca2+ on DHP binding affinity were observed with the mutants F1013G and Y1021K (Fig. 4; Table 2), even though these two substitutions typically coexist in CaV2 channels within the same nine-amino acid segment of the outer pore loop of domain III (Fig. 1B). This prompted us to construct a mutant channel in which Phe-1013 and Tyr-1021 have been replaced with glycine and lysine, respectively, resulting in the double mutant FY/GK. The double mutation causes a much larger increase in KD1 than either single mutation (Fig. 4A; Table 2), whereas the values of KC1 and
are intermediate between the two single mutants (Fig. 4, B and C; Table 2). Thus, the parameters for DHP and Ca2+ binding to FY/GK differ substantially from the sum of those for the single mutants, indicating that the two residues interact energetically in their function as DHP and Ca2+ binding determinants.
Thermodynamic mutant cycle analysis (Carter et al., 1984
; Hidalgo and MacKinnon, 1995
) was used to quantitate the energetic interaction between Phe-1013 and Tyr-1021 in DHP binding (Fig. 5). The coupling energy (RTln
) between Phe-1013 and Tyr-1021 was calculated in nominally zero Ca2+ using
KD1 values (Fig. 5A) and in 1 mM Ca2+ using KD1 values (Fig. 5B) by subtracting the 
G that results from replacing Phe-1013 with glycine in a wild-type background from the 
G that results from the same substitution made in a Y1021K background. These analyses demonstrate that the degree of coupling between Phe-1013 and Tyr-1021 in DHP binding is highly dependent on the occupancy of the selectivity filter by Ca2+. The coupling energy in nominally zero Ca2+ of 0.08 kcal/mol is negligible (Fig. 5A). This near-zero coupling energy indicates that, in the absence of Ca2+ (i.e., state [
1] of Fig. 2B, Scheme 1), Phe-1013 and Tyr-1021 are not energetically coupled. In contrast, the coupling energy between Phe-1013 and Tyr-1021 determined in 1 mM Ca2+ is substantial. Replacing Phe-1013 with glycine is highly dependent on whether the substitution is placed in a wild-type backbone (+0.22 kcal/mol) versus the Y1021K backbone (-1.23 kcal/mol). Therefore, when the selectivity filter is occupied by a single Ca2+ ion (i.e., state [Ca/
1] of Fig. 2B, Scheme 1), Phe-1013 and Tyr-1021 are strongly coupled with an energy of 1.45 kcal/mol [(+0.22 kcal/mol) - (-1.23 kcal/mol) = 1.45 kcal/mol]. This "coupled state", in which Phe-1013 and Tyr-1021 are energetically coupled and a single Ca2+ ion is bound, may represent a stably blocked, nonconducting state of the channel, as is addressed in the discussion below.
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The Coupling Factor
Plays an Important Role in Determining the Ca2+ Dependence of DHP Binding. The effects of the coupling factor
on the Ca2+ dependence of DHP binding to the mutant Ca2+ channels are illustrated in Fig. 6. These relationships between DHP binding affinity (KD1-1 and
KD1-1 in nanomolar-1) and Ca2+ concentration were simulated from the binding model in Fig. 2B, Scheme 1 and the binding parameters from Table 1. The DHP affinity of E292Q is 11-fold less than that of wild type with no Ca2+ ions bound to selectivity filter, but because of a 3.5-fold increase in
compared with wild type, the affinity is decreased by only 3-fold when one Ca2+ ion is bound (Fig. 6A). In contrast to E292Q,
values for the other glutamate mutants are smaller than those of wild type (Fig. 3). Consequently, the increases in DHP affinity upon binding of a single Ca2+ ion to these mutants are much less than for E292Q or wild type, as illustrated for E292K in Fig. 6A. In the absence of Ca2+, the DHP binding affinity for mutants E1014K and E1014Q are nearly identical to that of wild type (Fig. 6B). Increasing Ca2+ concentration has even less effect on DHP binding for E1014Q and E1014K (Fig. 6B) than for E292Q (Fig. 6A).
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was observed with mutant F1013G, whose value for
is 12.5-fold greater than that of wild type (Table 2). Although the affinity of mutant F1013G for DHPs is more than 11-fold lower than wild type in the absence of Ca2+, there is little difference in DHP binding affinity between wild type and F1013G when one Ca2+ ion is bound (Fig. 6C). In contrast, the affinity for DHP binding of Y1021K is similar to wild type in the absence of Ca2+ but 3-fold less than wild type when one Ca2+ ion is bound. This difference in the effect of Ca2+ on DHP binding to F1013G and Y1021K results from the 12.5-fold increase in
observed for F1013G compared with the 2-fold decrease in
for Y1021K. Overall, these comparisons illustrate that the coupling factor
is a key determinant of the effect of Ca2+ on DHP binding and of DHP affinity under physiological conditions. | Discussion |
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plays a major role in determining the pharmacological properties of the mutant channels. For example,
for the nonglutamate mutant F1013G is increased nearly 200-fold, whereas
for Y1021K is only one-half that of wild type. Thermodynamic mutant cycle analysis of these mutants indicates that Phe-1013 and Tyr-1021 are energetically coupled only when the outer pore is occupied by a single Ca2+ ion. Our findings are discussed in the context of current theoretical models for permeation (Nonner et al., 1998
Binding of DHP Antagonists and Ca2+ Stabilize a Blocked Conformation of the Outer Pore. In the absence of Ca2+, the outer pore is held in an open conformation ([
1]) by electrostatic repulsion between the four glutamate residues of the EEEE locus. When a single Ca2+ ion enters the selectivity filter, it acts as a countercharge and draws the four glutamate residues together to form a blockedconformation ([Ca/
1]) (Lipkind and Fozzard, 2001
). According to Fig. 2B, Scheme 1, DHP binding interacts allosterically with Ca2+ to stabilize the blocked conformation, thereby preventing Ca2+ conductance. Neutralizing any one of the four glutamate residues would destabilize this blocked conformation by reducing the magnitude of the attractive forces between the bound Ca2+ ion and the partially neutralized selectivity filter. In Fig. 3, the KD1 values for the glutamate-to-glutamine mutants are all larger than that of wild type. We postulate that neutralization of the residues in the selectivity filter would destabilize the open conformation of the outer pore as well, because the magnitude of the repulsive forces between the four glutamate residues would be decreased. The simulations in Fig. 6 show reduced DHP binding in the absence of Ca2+, indicating that this postulate holds true.
Introduction of Positively Charged Lysine Residues Mimics Binding of Ca2+. Replacing the substituted glutamine residues with positively charged lysine residues would be expected to partially mimic a Ca2+ ion by acting as a countercharge in the selectivity filter. If the charge-reversal substitutions were to perfectly mimic a single bound Ca2+ ion in the pore,
KD1 would equal KD1, and the coupling factor
would equal 1. We were pleased to find that the charge-reversal substitutions did follow this predicted trend, but as might be expected, inserting a lysine with a valence of only +1 into a constrained position in the selectivity filter does not perfectly mimic a free divalent Ca2+ ion in the pore. The affinity for DHP binding in nominal Ca2+ (i.e., 1/
KD1) to E292K and E1014K membranes is 3- and 2-fold higher than their charge-neutralized counterparts (Fig. 6). These findings indicate that the introduction of a positive charge in the selectivity filter makes the [
1] state of the outer pore behave more like the Ca2+-bound [Ca/
1] state.
The charge-reversal mutants are still sensitive to Ca2+, but the -fold change in binding affinity that occurs as the channel transitions from [
1] to [Ca/
1] (i.e., the coupling factor
) is reduced. This reduction occurs because replacing the neutral glutamine residues with positively charged lysine residues introduces repulsive forces between the positively charged amine of the lysine residue and the incoming Ca2+ ion. Consequently,
values for E292K and E1014K are decreased 8.5- and 3.3-fold compared with their glutamine-substituted counterparts. The combined effects on
KD1 and
indicate that the introduction of a positive charge in the pore partially mimics a single Ca2+ ion coordinated in the selectivity filter.
Mechanism for DHP Action. The cooperativity between DHP and Ca2+ binding suggests that DHPs modulate channel gating by promoting conformational changes in the outer pore. We used a "volume exclusion/charge neutralization" model to explain the reduced conductance of Ba2+ but not Ca2+ through the pores of CaV1.2 correlates of F1013G, Y1021K, and FY/GK (Wang et al., 2005
). The crystal diameters of Ca2+ and Na+ ions are nearly identical (2.00 versus 2.04 Å, respectively), yet each Ca2+ ion carries twice as much countercharge as a Na+ ion. Therefore, Ca2+ binds tightly to the selectivity filter because it is able to neutralize the highly charged EEEE locus without overcrowding it with counterions. Ba2+ and Ca2+ ions carry the same charge, but the ionic diameter of Ba2+ is approximately 36% larger than that of Ca2+. Thus, Ba2+ ions exhibit a higher degree of crowding, lower binding affinity and consequential faster exit rate (i.e., larger conductance) than Ca2+ ions. These results suggest that Ba2+ conductance is reduced because Ba2+ ions in mutant pores are less prone to overcrowding (Wang et al., 2000).
According to Fig. 2B, Scheme 1, Ca2+ and DHP binding shifts the configuration of the outer pore from an open state to a blocked state. [
1] or [2Ca/
1] are designated as conducting states in Fig. 2B, Scheme 1, because they represent channels conducting monovalent and divalent currents, respectively. The blocked state, [Ca/
1], is designated as a nonconducting state because single Ca2+ ions are known to block both monovalent and divalent (i.e., Ba2+) currents (Almers et al., 1984
; Hess and Tsien, 1984
; Hille, 2001
). Here, we combine the volume exclusion/charge neutralization model with Fig. 2B, Scheme 1, and propose that DHPs block mono- and divalent currents through the open [
1] and [2Ca/
1] states of the outer pore by stabilizing a nonconducting blocked state that is structurally and functionally analogous to [Ca/
1].
This postulate is consistent with the structural model of Lipkind and Fozzard (2001
). In this model, the eight carboxyl groups from the EEEE locus are thought to form three binding sites: a central high-affinity divalent cation binding site formed by four carboxyl groups flanked by two low-affinity sites, each composed of two carboxyl groups (Lipkind and Fozzard, 2001
). Divalent cation permeation through such a pore would depend on the occupancy of the two low-affinity sites, thus producing a conducting state ([2Ca/
1]). Ion permeation would be prevented if the central, high-affinity site were occupied by a single Ca2+ ion, thus producing a non-conducting state ([Ca/
1]). In the absence of divalent cations, repulsive forces in the EEEE locus would open the pore to greater than 4 Å and allow the passage of monovalent cations through the pore, thus producing a conducting state for monovalent cations ([
1]).
Given this scenario, the outer pore of an activated channel would switch between conducting ([2Ca/
1]) and nonconducting, blocked ([Ca/
1]) states. The overall open probability of a channel would be determined by the probability that the inner gate is open and the probability that the channel is not in state [Ca/
1], which is dependent on the dwell time of the single blocking Ca2+ ion residing in the selectivity filter. We propose that DHP antagonists increase this dwell time and that the open probability of the channel decreases as a consequence. It will require single-channel measurements to determine whether the mean open times decrease in the presence of DHP antagonists. Such experiments are very challenging using CaV1.1 channels, so this hypothesis will be tested using the cardiac CaV1.2 channel.
Energetic Coupling Mediated by Bound Ca2+. The conformational changes that underlie the transitions between the open and blocked states of the outer pore and modulate DHP binding affinity are dependent on the magnitude of the coupling factor
. We used thermodynamic mutant cycle analysis to assess the transition of the outer pore between the open and blocked states, [
1] and [Ca/
1], respectively. Our results demonstrate that Phe-1013 and Tyr-1021 are strongly coupled only when the selectivity filter is occupied by a single Ca2+ ion and not when the selectivity filter is unoccupied by Ca2+ (Fig. 2B, Scheme 1, box). It seems that the bound Ca2+ ion serves to mediate energetic coupling between these two aromatic amino acid residues, which are located on either side of Glu-1014 (Fig. 1). This coupling may result from electronic interactions between the two aromatic residues through the bound Ca2+ ion, structural rearrangements in the selectivity filter caused by Ca2+ binding, or both. We postulate that Phe-1013 and Tyr-1021 are energetically coupled when the pore is in a blocked, nonconducting state, and that DHP antagonists block the channel by stabilizing this same nonconducting conformational state. The positive energetic coupling between Phe-1013 and Tyr-1021 revealed here is likely to make a major contribution to the stability of this Ca2+-bound, blocked state.
| Acknowledgements |
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| Footnotes |
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ABBREVIATIONS: DHP, dihydropyridine; PN200-110, 4-(4-benzofurazanyl)-1,4-dihydro-2,6-dimethyl-3.5-pyridinedicarboxylic acid methyl 1-methyl ester.
Address correspondence to: Dr. Blaise Z. Peterson, Cellular and Molecular Physiology, H166, Penn State Milton S. Hershey Medical Center, College of Medicine, 500 University Dr., Room C6603, P.O. Box 850, Hershey, PA 17033-0850. E-mail: bpeterson{at}psu.edu
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