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Received for publication September 8, 2005.
Revised October 3, 2005.
Accepted for publication October 7, 2005.
ABSTRACT Conventional biochemical and molecular techniques previously identified several genes whose expression is regulated by the aryl hydrocarbon receptor (AHR). We sought to map the complete spectrum of AHR-dependent genes in adult liver using expression arrays to contrast mRNA profiles in Ahr-null mice (Ahr-/-) with those in mice with wildtype AHR (Ahr+/+). Transcript profiles were determined both in untreated mice and in mice treated 19 hours earlier with 1000 µg/kg of 2,3,7,8-tetrachlorodibenzo-p-dioxin (TCDD). Expression of 456 ProbeSets was significantly altered by TCDD in an AHR-dependent manner, including members of the classical AHRE-I gene battery such as Cyp1a1, Cyp1a2, Cyp1b1 and Nqo1. In the absence of exogenous ligand, AHR status alone affected expression of 392 ProbeSets, suggesting that the AHR has multiple functions in normal physiology. In Ahr-/-, only 32 ProbeSets exhibited responses to TCDD, indicating that the AHR is required for virtually all transcriptional responses to dioxin exposure in liver. The flavin-containing monooxygenases, Fmo2 and Fmo3, previously considered uninducible, were highly induced by TCDD in an AHR-dependent manner. Intriguingly, the estrogen receptor alpha as well as two estrogen-receptor-related genes (alpha and gamma) exhibit AHR-dependent expression, thereby extending cross-talk opportunities between the intensively-studied AHR and ER pathways. p53 binding sites are over-represented in genes downregulated by TCDD suggesting that TCDD inhibits p53 transcriptional activity. Overall, our study identifies a wide range of genes that depend on the AHR either for constitutive expression or for response to TCDD.
Key words:
Sex hormones, Regulation of gene expression, Cytochrome P450, Flavin monooxygenases, Regulation - transcriptional, Regulation - xenobiotic, Ah receptor, Toxicant-induced gene express
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