TABLE 1

GAF motif-containing proteins

Protein Number of GAF Motifs Functions Organisms
Adenylyl cyclase 1-2 Signal transduction Bacteria
Ethylene receptor 1 Ethylene metabolism Plant (Tracheophyta), bacteria
Sensory histidine kinase 1-2 Signal transduction Archea, bacteria, fungi, yeast
Two-component sensor histidine kinase 1-2-3-4 Signal transduction Bacteria, viruses
Ser/Thr protein kinase 1-2 Signal transduction Bacteria
Autolysin sensor kinase 1 Cell autolysis Bacteria
LytS and LytR 1 Cell autolysis Bacteria
cN phosphodiesterase 1-2 Signal transduction Protobacteria, bacteria, trypanosomatids, sponges, insects, nematodes, mammals
Diguanylate cyclase/phosphodiesterase 1-2 Signal transduction Bacteria
Methyl-accepting chemotaxis protein 1-3-4 Chemotaxis Bacteria
Phosphoglucose isomerase 1 Glucose metabolism Plant (Tracheophyta)
Phosphoenolpyruvate protein phosphotransferase 1 Glucose metabolism Bacteria
Nitrate/nitrile sensor protein 1 Nitrogen fixation Bacteria
Formate hydrogenlyase transcriptional activator 2 Gene regulation Bacteria
NifA-specific transcriptional regulator 1 Gene regulation, nitrogen fixation Bacteria, plasmodium
NtrC-specific transcriptional regulator 1 Gene regulation Dictyostelium, bacteria
Sigma factor regulator of σ-B activity 1-2 Gene regulation Bacteria
Transcriptional regulator AcoR 1 Gene regulation Bacteria
Glycerol metabolism operon regulatory protein 1 Gene regulation Bacteria
Bacterio-opsin activator 1 Phototransduction Archea
Circadian protein kinase 1 Phototransduction Archea
Phytochromes (A, B, C, D, E, F, N, O, P) 1 Phototransduction Plant (Tracheophyta)
Photoreceptor 1 Phototransduction Plant (Bryophyta)
Bacteriophytochrome 1 Phototransduction Bacteria
  • NifA, specific activator of Nif genes; NtrC, nitrogen-regulatory protein C.