SNP no. | SNP ID | Population | n | HWE P Value | Allele Frequency | Pairwise Differences Fisher's Exact P Value | |||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|
A | C | T | G | CH | ML | IN | EA | AA | |||||
% | |||||||||||||
1 | I-1/-274 (G/A) | CH | 89 | 1.00 | 0.0 | 100.0 | 1.00 | 1.00 | 1.00 | 0.50 | |||
ML | 86 | 1.00 | 0.0 | 100.0 | 1.00 | 1.00 | 0.50 | ||||||
IN | 88 | 1.00 | 0.0 | 100.0 | 1.00 | 0.50 | |||||||
EA | 95 | 1.00 | 0.0 | 100.0 | 0.23 | ||||||||
AA | 89 | 0.91 | 1.1 | 98.9 | |||||||||
2 | I-1/-223 (C/T) | CH | 89 | 1.00 | 100.0 | 0.0 | 1.00 | 1.00 | 1.00 | 1.00 | |||
ML | 86 | 1.00 | 100.0 | 0.0 | 1.00 | 1.00 | 1.00 | ||||||
IN | 88 | 1.00 | 100.0 | 0.0 | 1.00 | 1.00 | |||||||
EA | 95 | 0.96 | 99.5 | 0.5 | 1.00 | ||||||||
AA | 89 | 1.00 | 100.0 | 0.0 | |||||||||
3 | I-1/-146 (T/C) | CH | 89 | 1.00 | 0.0 | 100.0 | 1.00 | 1.00 | 1.00 | 1.00 | |||
ML | 86 | 1.00 | 0.0 | 100.0 | 1.00 | 1.00 | 1.00 | ||||||
IN | 88 | 1.00 | 0.0 | 100.0 | 1.00 | 1.00 | |||||||
EA | 95 | 1.00 | 0.0 | 100.0 | 0.48 | ||||||||
AA | 89 | 0.96 | 0.6 | 99.4 | |||||||||
4 | I-1/-60 (A/T) | CH | 89 | 1.00 | 100.0 | 0.0 | 1.00 | 1.00 | 1.00 | 0.01 | |||
ML | 86 | 1.00 | 100.0 | 0.0 | 1.00 | 1.00 | 0.01 | ||||||
IN | 88 | 1.00 | 100.0 | 0.0 | 1.00 | 0.01 | |||||||
EA | 95 | 1.00 | 100.0 | 0.0 | 5.82 × 10-3 | ||||||||
AA | 89 | 0.02 | 96.1 | 3.9 | |||||||||
5 | I-1/-41 (A/G) | CH | 89 | 0.20 | 89.9 | 10.1 | 0.11 | 4.87 × 10-6 | 1.64 × 10-5 | 5.09 × 10-5 | |||
ML | 86 | 0.61 | 94.8 | 5.2 | 1.58 × 10-3 | 7.86 × 10-3 | 9.56 × 10-3 | ||||||
IN | 88 | 1.00 | 100.0 | 0.0 | 1.00 | 1.00 | |||||||
EA | 95 | 0.96 | 99.5 | 0.5 | 1.00 | ||||||||
AA | 89 | 0.96 | 99.4 | 0.6 | |||||||||
6 | E1/-145 (C/G) | CH | 89 | 0.96 | 99.4 | 0.6 | 1.00 | 1.00 | 0.48 | 1.00 | |||
ML | 86 | 1.00 | 100.0 | 0.0 | 1.00 | 1.00 | 1.00 | ||||||
IN | 88 | 1.00 | 100.0 | 0.0 | 1.00 | 1.00 | |||||||
EA | 95 | 1.00 | 100.0 | 0.0 | 1.00 | ||||||||
AA | 89 | 1.00 | 100.0 | 0.0 | |||||||||
7 | e1/-129 (T/C) | CH | 89 | 0.66 | 4.5 | 95.5 | 0.81 | 0.04 | 1.00 | 0.49 | |||
ML | 86 | 0.61 | 5.2 | 94.8 | 9.9 × 10-3 | 1.00 | 0.65 | ||||||
IN | 88 | 0.96 | 0.6 | 99.4 | 0.02 | 2.91 × 10-3 | |||||||
EA | 95 | 0.62 | 4.7 | 95.3 | 0.50 | ||||||||
AA | 89 | 0.32 | 6.7 | 93.3 | |||||||||
8 | E1/-43 (A/G) | CH | 89 | 1.00 | 100.0 | 0.0 | 1.00 | 1.00 | 1.00 | 0.12 | |||
ML | 86 | 1.00 | 100.0 | 0.0 | 1.00 | 1.00 | 0.12 | ||||||
IN | 88 | 1.00 | 100.0 | 0.0 | 1.00 | 0.12 | |||||||
EA | 95 | 1.00 | 100.0 | 0.0 | 0.05 | ||||||||
AA | 89 | 0.83 | 97.8 | 2.2 |