[39] Unified approach to alignment and phylogenies
References (22)
- et al.
Adv. Appl. Math.
(1982) J. Comb. Theor.
(1974)Bull. Math. Biol.
(1984)Inf. Control
(1985)J. Comb. Theor.
(1971)Of ORFs and URFs
(1986)SIAM J Appl. Math.
(1975)- J. J. Hein, J. Theor. Biol. (submitted for...
J. Mol. Biol.
(1981)
Time Warps, String Edits and Macromolecules
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2012, Journal of Biological ChemistryCitation Excerpt :The theoretical molecular weight and isoelectric point of Ccr4d were calculated using the Expacy Web site. Homologous alignment was analyzed by the ClustalW program (version 1.60) (30), and phylogenetic analysis was performed using the Jotun Hein method (31). Human adult multiple tissue Northern blots (Clontech) or cancer profiling array (Clontech) were used, and a 500-bp probe of human ccr4d cDNA was labeled by random priming with [α-32P]dCTP (Amersham Biosciences).
Alignment of, and phylogenetic inference from, random sequences: The susceptibility of alternative alignment methods to creating artifactual resolution and support
2010, Molecular Phylogenetics and EvolutionApproximation algorithms for constrained generalized tree alignment problem
2009, Discrete Applied MathematicsCitation Excerpt :Wang and Gusfield [14,17,18] presented an improved version of 2-approximation algorithm and the polynomial-time approximation scheme. From the perspective of heuristics, Sankoff [12], Kruskal and Sankoff [11] and Altschul and Lipman [1], proposed iterative methods for tree alignment, Hein [7,8] introduced an approach for tree alignment based on the concept of sequence graph. For an excellent overview of algorithms for tree alignment and related problems, we refer the reader to Gusfield [6], and Wang and Jiang [16].
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