ReviewUbiquitin-dependent regulation of G protein-coupled receptor trafficking and signaling
Highlights
► Ubiquitination regulates GPCR trafficking and signaling. ► Ubiquitination regulates GPCR internalization and endosomal sorting. ► β-arrestin ubiquitination regulates GPCR endocytosis and MAPK signaling. ► β-arrestin regulates GPCR ubiquitination and endosomal sorting. ► GPCR ubiquitination and MAPK signaling may occur independent of β-arrestin.
Introduction
G protein-coupled receptors (GPCRs) belong to the largest family of signaling receptors [1]. GPCRs elicit cellular responses to multiple diverse stimuli and play essential roles in human health and have important clinical implications in various diseases [2], [3]. Upon binding to their cognate ligand, GPCRs typically signal via heterotrimeric GTP-binding proteins (G proteins) [1], [4], [5]. Heterotrimeric G proteins are comprised of an α-subunit (Gα) and a tightly associated β and γ-subunits (Gβγ). In the inactive state Gα is bound to GDP and once the GPCR is activated by its cognate ligand, conformational changes in the receptor induce the exchange of GDP for GTP on Gα leading to its activation and dissociation from the βγ subunits. The activated Gα (Gα-GTP) and dissociated βγ subunits activate downstream effector molecules contributing to GPCR signaling. One common effector molecule is adenylyl cyclase that catalyzes formation cyclic AMP (cAMP), which in turn activates the protein kinase A (PKA), a serine/threonine kinase that phosphorylates numerous substrates. Another effector molecule that is activated by predominantly Gαq is phospholipase C, which mediates the hydrolysis of phosphatidyl 4,5 bisphosphate to produce inositol 1,4,5-trisphosphate and diacyclglycerol, which in turn leads to calcium mobilization from intracellular stores and activation of protein kinase C (PKC), respectively. GPCRs may also signal independent of heterotrimeric G proteins, and this typically involves signaling by β-arrestins [6], [7]. β-Arrestins are best known to negatively regulate GPCR signaling via desensitization and endocytosis; however, β-arrestins also function as scaffolds that initiate new modes of GPCR signaling [8], [9], [10]. These properties of β-arrestins will be discussed below.
To ensure that signals are of the appropriate magnitude and duration, GPCR signaling is tightly regulated. Regulation of GPCR signaling involves multiple distinct temporal events that occur at the level of the receptor, G protein and downstream effector molecules [11], [12]. The latter steps include inactivation of the G protein and degradation of second messengers [13], [14]. Regulation at the level of the receptor involves a series of events, including receptor interactions with various cytosolic proteins and regulation by post-translational modifications such as phosphorylation and ubiquitination [11], [12]. Phosphorylation may occur by second-messenger-dependent protein kinases PKA and PKC, which promote GPCR signaling by phosphorylating effector molecules, but also function in a negative feedback loop by phosphorylating and desensitizing the GPCR to attenuate further signaling in a homologous or heterologous manner. Phosphorylation may also occur by another family of serine/threonine kinases known as G protein-coupled receptor kinases (GRKs). These kinases preferentially phosphorylate the activated or ligand bound form of the GPCR leading to homologous desensitization [11].
Phosphorylation by GRKs enhances GPCR binding to arrestins. Mammalian arrestins comprise a family of four proteins that can be sub-divided into two groups: visual (arrestin-1 and arrestin-4) and non-visual arrestins (β-arrestin-1 and β-arrestin-2, also known as arrestin-2 and arrestin-3, respectively) [15]. Expression of arrestin-1 and -4 is restricted to the visual system. Arrestin-1 is found in high abundance in rod cells whereas arrestin-4 is found in cone cells. In contrast, non-visual arrestins are ubiquitously expressed and regulate the signaling of most GPCRs. The classical function of arrestins is to mediate GPCR desensitization. Arrestins are typically recruited to the plasma membrane by activated GPCRs that are phosphorylated by GRKs [11]. Arrestin binding uncouples the receptor from G proteins via steric hindrance culminating in attenuated signaling [16]. Non-visual or β-arrestins promote GPCR internalization through clathrin-coated pits by binding directly to clathrin and β2-adaptin, two important components of the internalization machinery [17], [18]. Arrestins may also contribute to signal termination by promoting degradation of certain second messengers [13], [14].
In addition to established roles of phosphorylation and arrestin binding, recent studies have shown a critical function for ubiquitination of GPCRs in signal regulation. Over the past 10 years, numerous studies have documented that GPCRs and associated proteins are post-translationally modified by ubiquitination and shown an important role for ubiquitination in regulation of various aspects of receptor signaling and trafficking. Here, we will discuss how certain GPCRs are modified by ubiquitination, the function of GPCR ubiquitination and recent developments of the role for ubiquitin and other ubiquitin-like post-translational modifications on GPCR trafficking and signaling.
Section snippets
The ubiquitination machinery
Ubiquitin is an evolutionary conserved 76 amino acid polypeptide that is typically attached to proteins through the formation of an isopeptide bond between the carboxyl terminus of ubiquitin and the ε-amino group of lysine side chains on target proteins [19], [20]. This ATP-dependent linkage is catalyzed by the sequential activity of three enzymes: ubiquitin-activating enzyme (E1), ubiquitin-conjugating (UBC) enzyme (E2), and ubiquitin ligase (E3). First, ATP is linked to the C-terminal glycine
The ESCRT machinery
Ubiquitinated membrane proteins are sorted to intraluminal vesicles (ILVs) of multivesicular bodies (MVBs) via the ESCRT machinery [54], [55], [56]. This machinery is comprised of 4 distinct protein complexes (ESCRT-0, -I, -II and -III) that act in a sequential and coordinated manner with accessory factors to sort ubiquitinated cargo into ILVs of MVBs. ESCRT-0 is comprised of two subunits HRS and STAM [57], [58]. Each of these subunits can bind to ubiquitin through multiple UBDs in vitro and
A role for ubiquitin in GPCR trafficking
The first studies that lead to the discovery of ubiquitin function in GPCR trafficking came from examining internalization of the yeast α-mating factor GPCR sterol 2 (Ste2p). Truncation mutagenesis studies aimed at identifying determinants within the carboxy-terminal tail (C-tail) responsible for receptor internalization revealed a 9-amino acid motif sequence (S331INNDAKSS339) that was necessary and sufficient for promoting receptor internalization [71]. Mutation of the lysine (K337) residue to
β-Arrestins and ubiquitin-dependent signaling
Although ubiquitin functions to negatively regulate GPCR signaling by facilitating downregulation, it can also positively regulate GPCR signaling [9]. This is especially relevant to GPCR activation of the MAPK (mitogen-activated protein kinase) signaling cascades, including activation of extracellular signal-regulated kinases-1/2 (ERK-1/2) [7]. GPCR-induced activation of ERK-1/2 occurs through both G protein-dependent and -independent mechanisms [126], [127]. G protein-dependent activation of
Role of ubiquitin-like molecules in GPCR regulation
Ubiquitin belongs to a family of proteins known as ubiquitin-like molecules [134]. SUMO (small ubiquitin-like modifier) is a member of the ubiquitin-like molecules and is structurally related to ubiquitin but they share little amino acid identity. SUMO modification of proteins has been linked to several processes such as DNA repair, chromatin remodeling and signal transduction [135], [136], [137]. Unlike ubiquitination, proteins that are modified by SUMO typically have a SUMO consensus motif,
Conclusion
Ubiquitin has emerged as an important post-translational modification in the regulation of GPCR signaling. Recent developments have led to a greater understanding of the role ubiquitin plays in GPCR endocytosis and endosomal sorting and it is emerging that ubiquitin also has diverse roles in positive regulation of GPCR signaling. Although several GPCRs are modified by ubiquitin and are regulated by similar modifying enzymes, it appears that GPCRs are differentially regulated by ubiquitination,
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