Chemistry of ion coordination and hydration revealed by a K+ channel-Fab complex at 2.0 A resolution

Nature. 2001 Nov 1;414(6859):43-8. doi: 10.1038/35102009.

Abstract

Ion transport proteins must remove an ion's hydration shell to coordinate the ion selectively on the basis of its size and charge. To discover how the K+ channel solves this fundamental aspect of ion conduction, we solved the structure of the KcsA K+ channel in complex with a monoclonal Fab antibody fragment at 2.0 A resolution. Here we show how the K+ channel displaces water molecules around an ion at its extracellular entryway, and how it holds a K+ ion in a square antiprism of water molecules in a cavity near its intracellular entryway. Carbonyl oxygen atoms within the selectivity filter form a very similar square antiprism around each K+ binding site, as if to mimic the waters of hydration. The selectivity filter changes its ion coordination structure in low K+ solutions. This structural change is crucial to the operation of the selectivity filter in the cellular context, where the K+ ion concentration near the selectivity filter varies in response to channel gating.

Publication types

  • Research Support, Non-U.S. Gov't
  • Research Support, U.S. Gov't, P.H.S.

MeSH terms

  • Animals
  • Antibodies, Monoclonal / chemistry
  • Antibodies, Monoclonal / immunology
  • Antibodies, Monoclonal / metabolism
  • Bacterial Proteins*
  • Crystallography, X-Ray
  • Electrochemistry
  • Immunoglobulin Fab Fragments / chemistry*
  • Immunoglobulin Fab Fragments / immunology
  • Immunoglobulin Fab Fragments / metabolism
  • Mice
  • Models, Biological
  • Models, Molecular
  • Particle Size
  • Potassium / chemistry*
  • Potassium / metabolism
  • Potassium Channels / chemistry*
  • Potassium Channels / immunology
  • Potassium Channels / metabolism
  • Protein Conformation
  • Solutions
  • Water / chemistry*

Substances

  • Antibodies, Monoclonal
  • Bacterial Proteins
  • Immunoglobulin Fab Fragments
  • Potassium Channels
  • Solutions
  • prokaryotic potassium channel
  • Water
  • Potassium

Associated data

  • PDB/1K4C
  • PDB/1K4D