Determination of murine fetal Cyp1a1 and 1b1 expression by real-time fluorescence reverse transcription-polymerase chain reaction

Toxicol Appl Pharmacol. 2004 Dec 15;201(3):295-302. doi: 10.1016/j.taap.2004.05.011.

Abstract

We describe the application of quantitative RT-PCR methodology to study expression of Cyp1a1 and 1b1 in murine fetal tissue. We applied real-time PCR using the fluorescent dye, SYBR Green, to establish a very reliable, sensitive, specific, inexpensive, and rapid assay that was linear over a wide dynamic range of starting target gene copy number. The main point of this paper is to provide a detailed description of how to optimize real-time reverse transcription-polymerase chain reaction (RT-PCR) assays and, most importantly, to provide solutions for some of the commonly observed problems encountered when employing quantitative RT-PCR methods. We establish that use of SYBR Green for detection of PCR products was a powerful and reliable tool in our investigation of Cyp gene expression in murine fetal tissues, and demonstrate the kinetics of induction of Cyp1a1 and 1b1 in crosses between C57BL/6 and Balb/c mice. In addition, we demonstrate for the first time the induction of Cyp1b1 RNA expression in fetal lung and liver tissues following in utero exposure to 3-methylcholanthrene (MC), a polycyclic aromatic hydrocarbon. This assay for Cyp1a1 and 1b1 expression could be utilized equally well to detect other genes of interest in a variety of toxicological investigations.

Publication types

  • Research Support, U.S. Gov't, Non-P.H.S.
  • Research Support, U.S. Gov't, P.H.S.

MeSH terms

  • Algorithms
  • Animals
  • Aryl Hydrocarbon Hydroxylases / analysis
  • Aryl Hydrocarbon Hydroxylases / biosynthesis*
  • Aryl Hydrocarbon Hydroxylases / genetics
  • Computer Systems
  • Cytochrome P-450 CYP1A1 / analysis
  • Cytochrome P-450 CYP1A1 / biosynthesis*
  • Cytochrome P-450 CYP1A1 / genetics
  • Cytochrome P-450 CYP1B1
  • DNA Primers
  • DNA, Complementary / biosynthesis
  • Electrophoresis, Polyacrylamide Gel
  • Enzyme Induction / drug effects
  • Female
  • Fetus / enzymology*
  • Gene Expression Regulation, Enzymologic / genetics*
  • Liver / embryology
  • Liver / enzymology
  • Lung / embryology
  • Lung / enzymology
  • Methylcholanthrene / pharmacology
  • Mice
  • Mice, Inbred BALB C
  • Molecular Weight
  • Pregnancy
  • Quality Control
  • RNA / biosynthesis
  • Reference Standards
  • Reverse Transcriptase Polymerase Chain Reaction
  • Spectrometry, Fluorescence

Substances

  • DNA Primers
  • DNA, Complementary
  • Methylcholanthrene
  • RNA
  • Aryl Hydrocarbon Hydroxylases
  • Cyp1b1 protein, mouse
  • Cytochrome P-450 CYP1A1
  • Cytochrome P-450 CYP1B1