Co- and post-translational translocation through the protein-conducting channel: analogous mechanisms at work?

Nat Struct Mol Biol. 2006 Nov;13(11):957-64. doi: 10.1038/nsmb1166.

Abstract

Many proteins are translocated across, or integrated into, membranes. Both functions are fulfilled by the 'translocon/translocase', which contains a membrane-embedded protein-conducting channel (PCC) and associated soluble factors that drive translocation and insertion reactions using nucleotide triphosphates as fuel. This perspective focuses on reinterpreting existing experimental data in light of a recently proposed PCC model comprising a front-to-front dimer of SecY or Sec61 heterotrimeric complexes. In this new framework, we propose (i) a revised model for SRP-SR-mediated docking of the ribosome-nascent polypeptide to the PCC; (ii) that the dynamic interplay between protein substrate, soluble factors and PCC controls the opening and closing of a transmembrane channel across, and/or a lateral gate into, the membrane; and (iii) that co- and post-translational translocation, involving the ribosome and SecA, respectively, not only converge at the PCC but also use analogous mechanisms for coordinating protein translocation.

Publication types

  • Research Support, N.I.H., Extramural
  • Research Support, Non-U.S. Gov't
  • Research Support, U.S. Gov't, Non-P.H.S.

MeSH terms

  • Archaea / metabolism
  • Bacteria / metabolism
  • Cell Membrane / metabolism
  • Crystallography, X-Ray
  • Eukaryotic Cells / metabolism
  • Membrane Proteins / chemistry
  • Membrane Proteins / metabolism*
  • Models, Molecular
  • Protein Biosynthesis*
  • Protein Conformation
  • Protein Transport
  • Proteins / metabolism*
  • Ribosomes / metabolism
  • SEC Translocation Channels
  • Signal Recognition Particle / metabolism

Substances

  • Membrane Proteins
  • Proteins
  • SEC Translocation Channels
  • Signal Recognition Particle