1,2,3-Triazole-heme interactions in cytochrome P450: functionally competent triazole-water-heme complexes

Biochemistry. 2012 Aug 14;51(32):6441-57. doi: 10.1021/bi300744z. Epub 2012 Jul 31.

Abstract

In comparison to imidazole (IMZ) and 1,2,4-triazole (1,2,4-TRZ), the isosteric 1,2,3-triazole (1,2,3-TRZ) is unrepresented among cytochrome P450 (CYP) inhibitors. This is surprising because 1,2,3-TRZs are easily obtained via "click" chemistry. To understand this underrepresentation of 1,2,3-TRZs among CYP inhibitors, thermodynamic and density functional theory computational studies were performed with unsubstituted IMZ, 1,2,4-TRZ, and 1,2,3-TRZ. The results indicate that the lower affinity of 1,2,3-TRZ for the heme iron includes a large unfavorable entropy term likely originating in solvent-1,2,3-TRZ interactions; the difference is not solely due to differences in the enthalpy of heme-ligand interactions. In addition, the 1,2,3-TRZ fragment was incorporated into a well-established CYP3A4 substrate and mechanism-based inactivator, 17-α-ethynylestradiol (17EE), via click chemistry. This derivative, 17-click, yielded optical spectra consistent with low-spin ferric heme iron (type II) in contrast to 17EE, which yields a high-spin complex (type I). Furthermore, the rate of CYP3A4-mediated metabolism of 17-click was comparable to that of 17EE, with a different regioselectivity. Surprisingly, continuous-wave electron paramagnetic resonance (EPR) and HYSCORE EPR spectroscopy indicate that 17-click does not displace water from the sixth axial ligand position of CYP3A4 as expected for a type II ligand. We propose a binding model in which 17-click pendant 1,2,3-TRZ hydrogen bonds with the sixth axial water ligand. The results demonstrate the potential for 1,2,3-TRZ to form metabolically labile water-bridged low-spin heme complexes, consistent with recent evidence that nitrogenous type II ligands of CYPs can be efficiently metabolized. The specific case of [CYP3A4·17-click] highlights the risk of interpreting CYP-ligand complex structure on the basis of optical spectra.

Publication types

  • Research Support, N.I.H., Extramural

MeSH terms

  • Click Chemistry
  • Cytochrome P-450 CYP3A / chemistry
  • Cytochrome P-450 CYP3A Inhibitors
  • Cytochrome P-450 Enzyme Inhibitors
  • Cytochrome P-450 Enzyme System / chemistry*
  • Electron Spin Resonance Spectroscopy
  • Ethinyl Estradiol / analogs & derivatives
  • Ethinyl Estradiol / chemical synthesis
  • Ethinyl Estradiol / chemistry
  • Heme / chemistry*
  • Imidazoles / chemistry
  • Isomerism
  • Kinetics
  • Magnetic Resonance Spectroscopy
  • Protein Binding
  • Quantum Theory
  • Thermodynamics
  • Triazoles / chemical synthesis
  • Triazoles / chemistry*
  • Water / chemistry*

Substances

  • Cytochrome P-450 CYP3A Inhibitors
  • Cytochrome P-450 Enzyme Inhibitors
  • Imidazoles
  • Triazoles
  • Water
  • Ethinyl Estradiol
  • Heme
  • imidazole
  • Cytochrome P-450 Enzyme System
  • Cytochrome P-450 CYP3A