The primary structure of the alpha subunit of human elongation factor 1. Structural aspects of guanine-nucleotide-binding sites

Eur J Biochem. 1986 Feb 17;155(1):167-71. doi: 10.1111/j.1432-1033.1986.tb09472.x.

Abstract

The primary structure of the alpha subunit of elongation factor 1 (EF-1 alpha) from human MOLT 4 cells was determined by cDNA sequencing. The data show that the conservation of the amino acid sequence is more than 80% when compared with yeast and Artemia EF-1 alpha. An inventory of amino acid sequences around the guanine-nucleotide-binding site in elongation factor Tu from Escherichia coli and homologous amino acid sequences in G proteins, initiation and elongation factors and proteins from the RAS family shows two regions containing conserved sequence elements. Region I has the sequence apolar-Xaa-Xaa-Xaa-Gly-Xaa-Xaa-Yaa-Xaa-Gly-LYs-Thr(Ser)- -Xaa-Xaa-Xaa-Xaa-X-apolar. Except for RAS proteins, Yaa is always an acidic amino acid residue. Region II is characterized by the invariant sequence apolar-apolar-Xaa-Xaa-Asn-Lys-Xaa-Asp. In order to facilitate sequence comparison we have used a graphic display, which is based on the hydrophilicity values of individual amino acids in a sequence.

Publication types

  • Comparative Study
  • Research Support, Non-U.S. Gov't

MeSH terms

  • Amino Acid Sequence
  • Animals
  • Artemia
  • Base Sequence
  • Binding Sites
  • Cloning, Molecular
  • DNA
  • Guanine Nucleotides / metabolism*
  • Humans
  • Peptide Elongation Factor 1
  • Peptide Elongation Factors* / metabolism
  • Saccharomyces cerevisiae

Substances

  • Guanine Nucleotides
  • Peptide Elongation Factor 1
  • Peptide Elongation Factors
  • DNA

Associated data

  • GENBANK/X03558