Selection of peptides that bind to plasminogen activator inhibitor 1 (PAI-1) using random peptide phage-display libraries

FEBS Lett. 1998 Jul 17;431(2):170-4. doi: 10.1016/s0014-5793(98)00742-x.

Abstract

Large random hexa- and decapenta-peptide libraries were constructed and displayed on the surface of the filamentous phagemid pComb8. Panning of the hexa-peptide library on immobilized plasminogen activator inhibitor 1 (PAI-1) specifically selected a minor fraction of concatemers, indicating that binding to PAI-1 requires an extended amino acid sequence. Accordingly, the decapenta-peptide library exclusively yielded PAI-1 binding peptides of 15 amino acid residues. None of these phage-bound peptides prevented the interaction between PAI-1 and its target serine protease urokinase (u-PA). To isolate peptides that block the interaction between PAI-1 and u-PA, phages bound to immobilized PAI-1 were eluted by incubation with u-PA. Remarkably, this procedure resulted in elution of a unique phage type that harbors a concatemer of decapentamers, consisting of 49 amino acid residues with no obvious similarity to the primary sequence of PAI-1 or u-PA.

Publication types

  • Research Support, Non-U.S. Gov't

MeSH terms

  • Amino Acid Sequence
  • Bacteriophages
  • Binding Sites
  • Humans
  • Molecular Sequence Data
  • Peptide Library*
  • Peptides / metabolism*
  • Plasminogen Activator Inhibitor 1 / metabolism*
  • Sequence Homology, Amino Acid
  • Urokinase-Type Plasminogen Activator / metabolism

Substances

  • Peptide Library
  • Peptides
  • Plasminogen Activator Inhibitor 1
  • Urokinase-Type Plasminogen Activator