Biological Pathway Exchange (BioPAX) is a standard language to represent biological
pathways at the molecular and cellular level and to facilitate the exchange of pathway data. The …

The TRANSFAC ® database on transcription factors, their binding sites, nucleotide distribution
matrices and regulated genes as well as the complementing database TRANSCompel ® …

The TRANSFAC ® database on eukaryotic transcriptional regulation, comprising data on
transcription factors, their target genes and regulatory binding sites, has been extended and …

TRANSFAC, TRRD (Transcription Regulatory Region Database) and COMPEL are databases
which store information about transcriptional regulation in eukaryotic cells. The three …

Match TM is a weight matrix-based tool for searching putative transcription factor binding
sites in DNA sequences. Match TM is closely interconnected and distributed together with the …

The identification of potential regulatory motifs in new sequence data is increasingly important
for experimental design. Those motifs are commonly located by matches to IUPAC strings …

TRANSFAC: A Database on Transcription Factors and Their DNA Binding Sites | Nucleic Acids
Research | Oxford Academic Skip to Main Content Advertisement Oxford Academic Journals …

… and Wingender,E., manuscript in preparation) which is used here to represent the expression
patterns of human transcription factors, and to assemble expression profiles for selected …

This listing might provide a basis to systematize the puzzle of transcrip-tion factors, particularly
those for the genes which are transcribed by eukaryotic RNA polymerase II. Accordingly, …

The TRANSFAC database on transcription factors and their DNA-binding sites and profiles (
http://www.gene-regulation.de/ ) has been quantitatively extended and supplemented by a …