A highly flexible tRNA acylation method for non-natural polypeptide synthesis

H Murakami, A Ohta, H Ashigai, H Suga - Nature Methods, 2006 - nature.com
Here we describe a de novo tRNA acylation system, the flexizyme (Fx) system, for the
preparation of acyl tRNAs with nearly unlimited selection of amino and hydroxy acids and tRNAs. …

Macrocyclic peptides as drug candidates: recent progress and remaining challenges

AA Vinogradov, Y Yin, H Suga - Journal of the American Chemical …, 2019 - ACS Publications
… We are thankful to our current and past co-workers at the Suga laboratory for creating an …
The body of the works discussed in this article from the Suga laboratory was supported by …

The RaPID platform for the discovery of pseudo-natural macrocyclic peptides

Y Goto, H Suga - Accounts of Chemical Research, 2021 - ACS Publications
Conspectus Although macrocyclic peptides bearing exotic building blocks have proven their
utility as pharmaceuticals, the sources of macrocyclic peptide drugs have been largely …

[PDF][PDF] Induction and inhibition of Pseudomonas aeruginosa quorum sensing by synthetic autoinducer analogs

KM Smith, Y Bu, H Suga - Chemistry & biology, 2003 - cell.com
We synthesized a library of Pseudomonas aeruginosa autoinducer analogs with variation
targeted to the homoserine lactone (HSL) moiety and discovered a new agonist, 3-oxo-C 12 -(2…

[PDF][PDF] Natural product-like macrocyclic N-methyl-peptide inhibitors against a ubiquitin ligase uncovered from a ribosome-expressed de novo library

…, S Miyagawa, T Kawakami, T Katoh, Y Goto, H Suga - Chemistry & biology, 2011 - cell.com
Naturally occurring peptides often possess macrocyclic and N-methylated backbone. These
features grant them structural rigidity, high affinity to targets, proteolytic resistance, and …

Selection-based discovery of druglike macrocyclic peptides

…, T Katoh, Y Goto, H Suga - Annual review of …, 2014 - annualreviews.org
Macrocyclic peptides are an emerging class of therapeutics that can modulate protein–protein
interactions. In contrast to the heavily automated high-throughput screening systems …

Molecular mechanisms of bacterial quorum sensing as a new drug target

H Suga, KM Smith - Current opinion in chemical biology, 2003 - Elsevier
… group of the ester bond in HSL accepts an H-bond from the indole NH group of Trp57, … an
H-bond. Thus the OH and keto group of 4 and 5, respectively, can mimic the ketone of HSL as H

Flexizymes for genetic code reprogramming

Y Goto, T Katoh, H Suga - Nature protocols, 2011 - nature.com
Genetic code reprogramming is a method for the reassignment of arbitrary codons from
proteinogenic amino acids to nonproteinogenic ones; thus, specific sequences of nonstandard …

Structural basis for the drug extrusion mechanism by a MATE multidrug transporter

…, K Kumazaki, T Tsukazaki, R Ishitani, H Suga… - Nature, 2013 - nature.com
… export xenobiotics using an electrochemical gradient of H + or Na + across the membrane 1
, … Here we present the crystal structures of the H + -driven MATE transporter from Pyrococcus …

Reprogramming the translation initiation for the synthesis of physiologically stable cyclic peptides

…, Y Sako, Y Yamagishi, H Murakami, H Suga - ACS chemical …, 2008 - ACS Publications
The initiation codon dictates that the translation initiation event exclusively begins with
methionine. We report here a new technology to reprogram the initiation event, where various …