Abstract
All-trans-retinoic acid (atRA), the active metabolite of vitamin A, induces gene transcription via binding to nuclear retinoic acid receptors (RARs). The primary hydroxylated metabolites formed from atRA by CYP26A1, and the subsequent metabolite 4-oxo-atRA, bind to RARs and potentially have biologic activity. Hence, CYP26A1, the main atRA hydroxylase, may function either to deplete bioactive retinoids or to form active metabolites. This study aimed to determine the role of CYP26A1 in modulating RAR activation via formation and elimination of active retinoids. After treatment of HepG2 cells with atRA, (4S)-OH-atRA, (4R)-OH-atRA, 4-oxo-atRA, and 18-OH-atRA, mRNAs of CYP26A1 and RARβ were increased 300- to 3000-fold, with 4-oxo-atRA and atRA being the most potent inducers. However, >60% of the 4-OH-atRA enantiomers were converted to 4-oxo-atRA in the first 12 hours of treatment, suggesting that the activity of the 4-OH-atRA was due to 4-oxo-atRA. In human hepatocytes, atRA, 4-OH-atRA, and 4-oxo-atRA induced CYP26A1 and 4-oxo-atRA formation was observed from 4-OH-atRA. In HepG2 cells, 4-oxo-atRA formation was observed even in the absence of CYP26A1 activity and this formation was not inhibited by ketoconazole. In human liver microsomes, 4-oxo-atRA formation was supported by NAD+, suggesting that 4-oxo-atRA formation is mediated by a microsomal alcohol dehydrogenase. Although 4-oxo-atRA was not formed by CYP26A1, it was depleted by CYP26A1 (Km = 63 nM and intrinsic clearance = 90 μl/min per pmol). Similarly, CYP26A1 depleted 18-OH-atRA and the 4-OH-atRA enantiomers. These data support the role of CYP26A1 to clear bioactive retinoids, and suggest that the enzyme forming active 4-oxo-atRA may be important in modulating retinoid action.
Introduction
All-trans-retinoic acid (atRA), the active metabolite of vitamin A (retinol), is an essential signaling molecule during fetal development and adult life. Retinoid signaling plays a role in the maintenance of healthy skin, epithelia and the immune system (Napoli, 2012), regulation of insulin-stimulated glucose secretion (Kane et al., 2010), lipid homeostasis (Bonet et al., 2012), embryonic development (Duester, 2008), stem cell and neuronal differentiation (Maden, 2007; Gudas and Wagner, 2011), tissue repair and regeneration (Gudas, 2012) and spermatogenesis (Chung and Wolgemuth, 2004; Hogarth and Griswold, 2013). The biologic activity of atRA is largely mediated by its binding to the nuclear ligand–activated retinoic acid receptors (RARs) and the peroxisome proliferator-activated receptor β/δ (Schug et al., 2007; Yu et al., 2012). As such, retinoid signaling in a specific cell depends on the expression of the nuclear receptors and the concentration of atRA within the cell (McBurney, 1993; Rhinn and Dollé, 2012). Hence, it is not surprising that RARs are expressed in a cell type–specific fashion (Chambon, 1996), and atRA concentrations vary considerably among retinoid responsive tissues (Kane et al., 2008).
The concentration of atRA is regulated by synthesis from retinol via retinaldehyde by alcohol and aldehyde dehydrogenases and elimination by cytochrome P450 (P450) enzymes (Napoli, 2012). The enzymes of the CYP26 family are primarily responsible for atRA clearance forming the hydroxylated metabolites 4-OH-atRA, 18-OH-atRA (Fig. 1), and perhaps 16-OH-atRA (White et al., 1997, 2000; Chithalen et al., 2002; Thatcher et al., 2011; Topletz et al., 2012). CYP26A1 is the predominant atRA hydroxylase in the adult human liver (Thatcher et al., 2010; Topletz et al., 2012), and it is highly inducible by atRA via RAR-mediated mechanism (White et al., 1997; Yamamoto et al., 2000; Loudig et al., 2005; Tay et al., 2010) leading to autoinduction of CYP26A1 by atRA. This autoinduction allows for efficient feedback for atRA regulating its own clearance but also suggests that atRA will induce the formation of potentially active metabolites by CYP26A1. The primary hydroxylation products 4-OH-atRA, 18-OH-atRA, and the sequential metabolite 4-oxo-atRA from 4-OH-atRA bind to RARs including RARα (Idres et al., 2002). Since CYP26A1 forms metabolites that have RAR binding affinity, it is possible that CYP26A1 may play a role in forming metabolites with specific retinoid activity. However, the biologic role of atRA metabolites is largely unknown. Although genetic studies have shown that the developmental malformations of CYP26A1−/− mice are mainly due to excess atRA and not to the lack of formation of an active metabolite (Niederreither et al., 2002), it is not known whether the metabolites are important for specific processes later in life.
Of the metabolites from atRA, 4-oxo-atRA is the most studied and the most potent in terms of RAR activation, having a 3-fold lower EC50 than atRA toward RARα (Idres et al., 2002). 4-Oxo-atRA is also detected in human plasma, suggesting that it may have biologic significance (Muindi et al., 1992b; Arnold et al., 2012). The potential biologic importance of 4-oxo-atRA is supported by studies that show that 4-oxo-atRA is teratogenic in mice and zebrafish with similar potency as atRA itself (Creech Kraft et al., 1989; Herrmann, 1995). In human skin cells, 4-oxo-atRA displays strong transcriptional regulatory activity (Baron et al., 2005). In Xenopus embryos, 4-oxo-atRA modulates positional specification (Pijnappel et al., 1993). Finally, 4-oxo-atRA induces spermatogenesis in vitamin A–deficient mice (Gaemers et al., 1996). Whether 4-oxo-atRA is formed by CYP26 enzymes is not clear, and the processes that regulate the homeostasis of 4-oxo-atRA are not well understood. As such, the importance of 4-oxo-atRA in retinoid biology is poorly defined.
This study aimed to determine whether CYP26A1 is induced by oxidated metabolites of atRA, and whether CYP26A1 forms and clears the oxidated metabolites including 4-oxo-atRA. The results of this study show that oxidated atRA metabolites are substrates of CYP26A1, and they induce their own clearance by CYP26A1. However, formation of 4-oxo-atRA, the metabolite with high RAR activation potency, is not mediated by CYP26A1 in cells or in the human liver. Taken together, these results support the conclusion that CYP26A1 functions primarily to eliminate bioactive retinoids, and that additional enzymes are required to form the bioactive metabolites of atRA such as 4-oxo-atRA.
Materials and Methods
Chemicals and Reagents.
atRA, ketoconazole, fomepizole (4-methylpyrazole), cimetidine, testosterone, and carbenoxolone were purchased from Sigma-Aldrich (St. Louis, MO). Talarozole was purchased from MedChem Express (Monmouth, NJ). 4-Oxo-atRA-d3 (3 deuteriums at the C-18 position) and atRA-d5 (2 deuteriums at the C-4 and 3 deuteriums at the C-18 positions) were purchased from Toronto Research Chemicals (North York, Ontario, Canada). (4R)-OH-atRA, (4S)-OH-atRA, 4-oxo-atRA, and 18-OH-atRA (Fig. 1) were synthesized as previously described (Shimshoni et al., 2012; Topletz et al., 2012). Optima-grade water, optima-grade acetonitrile, ethanol, and ethyl acetate were purchased from Fisher Scientific (Pittsburgh, PA). Biologic DNAase/RNAase-free water was purchased from Qiagen (Valencia, CA).
Quantitative Analysis of Retinoids.
atRA, 4-oxo-atRA, (4R)-OH-atRA, (4S)-OH-atRA, and 18-OH-atRA (Fig. 1) were extracted from cell and medium samples and from incubations using ethyl acetate under red light as previously described (Thatcher et al., 2010; Topletz et al., 2012). The solvent was evaporated under a nitrogen stream, and the dry residue was reconstituted in 100 µl acetonitrile for analysis by high-performance liquid chromatography (HPLC) coupled to tandem mass spectrometry (MS/MS).
Analytes were separated using an Agilent 1290 Infinity UHPLC system, an Agilent Zorbax C18 column (3.5 µm, 2.1 mm × 100 mm), and a mobile phase flow of 0.2 ml/min and a linear 30-minute gradient with initial mobile phase of 10:90 acetonitrile/aqueous 0.1% formic acid increasing to 90:10 acetonitrile/aqueous 0.1% formic acid (held for 2 minutes) followed by a re-equilibration back to initial mobile phase conditions over 3 minutes. The analytes were detected using an AB Sciex API 5500 Q/LIT mass spectrometer (AB Sciex, Framingham, MA) using negative ion electrospray detection, with the following: declustering potentials of −80 V (4-OH-atRA and 18-OH-atRA), −90 V (4-oxo-atRA-d3), −140 V (atRA), −100 V (atRA-d5), and −95 V (4-oxo-atRA and 4-oxo-13-cisRA); collision energies of −28 eV (4-OH-atRA and 18-OH-atRA), −25 eV (4-oxo-atRA-d3), −40 eV (atRA-d5), and −22 eV (atRA, 4-oxo-atRA, and 4-oxo-13-cisRA); and collision exit potentials of −7 V (atRA, 4-OH-atRA, and 18-OH-atRA), −5 V (4-oxo-atRA and 4-oxo-13-cisRA), −16 V (atRA-d5), and −10 V (4-oxo-atRA-d3). The parent-fragment MS/MS transitions of m/z 299 → 255 Da (atRA), 304 → 260 Da (atRA-d5), 315 → 253 Da (4-OH-atRA and 18-OH-atRA), 313 → 269 Da (4-oxo-atRA and 4-oxo-13-cisRA), and 316 → 272 Da (4-oxo-atRA-d3) were monitored. The lower limits of quantification were 3.1 nM for 4-OH-atRA, 0.3 nM for 4-oxo-atRA, and 6.3 nM for 18-OH-atRA. Standard curves were reproducible within 15% of each other from three separate extractions on three different days of analysis.
Cell Culture and mRNA Analysis.
The HepG2 cells were obtained and cultured in a humidified incubator at 37°C as previously described (Tay et al., 2010) under an atmosphere of 5% carbon dioxide using ATCC Minimum Essential Medium (American Type Culture Collection, Manassas, VA) with Earle’s balanced salt solution supplemented with 10% fetal bovine serum and 0.5% penicillin as the growth medium (Tay et al., 2010). For atRA and atRA metabolite treatments, cells were plated into six-well plates (106 cells per well) in 2 ml medium/well and cells were allowed to adhere for 24 hours prior to treatments. The cells were treated for 48 hours in 2 ml medium, changing the medium (+ inducer) at 24 hours. The treatments included atRA, 4-oxo-atRA, (4R)-OH-atRA, (4S)-OH-atRA, or 18-OH-atRA at concentrations of 1 nM to 1 µM or 0.1% EtOH as a vehicle control. All treatments were performed in triplicate. At the completion of each treatment, the medium in each well was aspirated and cells were harvested for mRNA extraction. The time course of CYP26A1 and RARβ induction in HepG2 cells was characterized after a 1-µM treatment with atRA. The cells were cultured as above but cells were harvested at 6, 12, 24, and 48 hours after treatment for mRNA extraction.
Pooled cryopreserved human hepatocytes from two male donors and one female donor were obtained from Life Technologies (Grand Island, NY). Hepatocytes were thawed at 37°C, placed into plating media (InVitroGro CP medium plus Torpedo antibiotic mix; Bioreclamation IVT, Baltimore, MD), and cell viability was confirmed. Hepatocytes were plated at 106 live cells per well in six-well collagen type I–coated plates (Becton Dickinson, Franklin Lakes, NJ) and were allowed to attach for approximately 8 hours. The plating media was then replaced with Williams E media containing primary hepatocyte maintenance supplements (Life Technologies) and cells were treated with atRA, 4-OH-atRA, or 4-oxo-atRA each at 100, 500, and 1000 nM or ethanol as a vehicle control for 2 hours. The short, 2-hour treatment period was chosen to minimize retinoid depletion and metabolism in the treatments. Immediately after addition of the retinoids and at the end of the 2-hour induction period, an aliquot of the media was collected for retinoid concentration measurements as described above. At the end of the 2-hour induction period, the cells were collected for mRNA measurements.
For mRNA extraction, 300 μl of TRI reagent (Invitrogen, Grand Island, NY) was added to each well and mRNA was extracted according to the manufacturer’s recommendations. Total RNA was quantified using the Nanodrop 2000c Spectrophotometer (Thermo Fisher Scientific, Waltham, MA) and RNA quality was determined by gel electrophoresis. cDNA was generated from 1 µg mRNA using TaqMan gene expression reagents (Applied Biosystems, Carlsbad, CA). Reverse-transcription polymerase chain reaction was used to quantify CYP26A1 and RARβ mRNA (StepOnePlus; Applied Biosystems) as previously described (Tay et al., 2010). TaqMan real-time gene expression master mix and polymerase chain reaction primers and fluorescent probes were obtained from Applied Biosystems (Foster City, CA). Probes were labeled with the 5′-reporter dye 5-carboxyfluorescein and a nonfluorescent black hole quencher on the 3′ end. Primer and probe pairs used included the following: CYP26A1 (Hs00175627_m1, FAM), glyceraldehyde-3-phosphate dehydrogenase (Hs99999905_m1, VIC), RARα_ (Hs00940446_m1, FAM), RARβ_ (Hs00233407_m1, FAM), RARγ (Hs00171273_m1, FAM), cellular retinoic acid binding protein (CRABP)-I (Hs00171635_m1, FAM), and CRABP-II (Hs00275636_m1, FAM). Glyceraldehyde-3-phosphate dehydrogenase was used as the housekeeping gene and all assays were done as multiplexes. All triplicate samples were analyzed in duplicate. Changes in target mRNA were measured using relative quantification (fold-difference) and the ΔΔ cycle threshold method (Tay et al., 2010) using GraphPad Prism software (version 5; GraphPad Software Inc., La Jolla, CA).
RAR Reporter Assays.
Human RARα, RARβ, and RARγ reporter assays (Indigo Biosciences, State College, PA) were used to determine the ability of atRA, 4-OH-atRA, and 4-oxo-atRA to act as agonists of human RARs. In brief, reporter cells were rapidly thawed into prewarmed cell recovery media and plated into a 96-well assay plate (100 µl reporter cell suspension per well). atRA and its metabolites (0–2 µM, final concentration in compound screening media) were then added to the assay plate. Each reporter assay plate was placed in a humidified incubator (37°C/5% CO2) for approximately 20 hours. Assay plates were then removed from the incubator and the contents aspirated from each well. Luciferase detection reagent (100 µl) was added to each well and the plates allowed to rest at room temperature for 30 minutes. Luminescence was then measured on a Tecan Safire2 plate reader (Tecan, San Jose, CA) set to quantify luminescence using a read time of 500 milliseconds per well.
Retinoid Depletion and Subsequent Metabolite Formation in HepG2 Cells.
Depletion of atRA, 4-oxo-atRA, (4R)-OH-atRA, (4S)-OH-atRA, or 18-OH-atRA and formation of subsequent metabolites from these substrates in HepG2 cells was measured in the media and in the cells to assess the exposure of the cells to the bioactive retinoids. HepG2 cells were plated and cultured as described above. Cells were treated with atRA, 4-oxo-atRA, (4R)-OH-atRA, (4S)-OH-atRA, or 18-OH-atRA at a concentration of 1 µM (nominal initial concentration in the medium) for 48 hours. The medium (+ inducer) was changed after 24 hours to mimic the design of the mRNA induction experiments. At 0, 1, 4, 8, 12, 24, and 48 hours, 1 ml of the medium was removed, an internal standard (atRA-d5; 20 µl of a 2.5 µM stock solution) was added, and samples were extracted using ethyl acetate as described above. As controls, 4-oxo-atRA, (4R)-OH-atRA, or (4S)-OH-atRA (1 µM) were incubated in 1 ml of medium each for 4 hours in a 37°C oscillating water bath and the media were analyzed for substrate depletion and metabolite formation. Cells were collected at 1, 4, 8, and 12 hours after the beginning of the treatments by addition of 1 ml acetonitrile on the cells in each well. One milliliter of potassium phosphate (KPi) buffer (100 mM, pH 7.4) was added to the acetonitrile phase to facilitate separation of the organic and aqueous layers, an internal standard (4-oxo-RA-d3; 20 µl of a 2.5 µM stock solution) was added, and samples were extracted with ethyl acetate as previously described. The amounts of analytes in the extract were determined by liquid chromatography (LC)–MS/MS and the retinoid concentrations in the cells were calculated using a total intercellular volume of 1 µl/106 HepG2 cells (Kewn et al., 2000).
Measurement of CYP26A1 Activity in HepG2 Cells.
The formation of 4-OH-atRA-d4 and 4-oxo-atRA-d3 from atRA-d5 was used to determine CYP26A1 activity and induction during treatment of HepG2 cells with atRA. HepG2 cells were treated for 48 hours with atRA (1 µM final concentration in the medium). The medium containing atRA was changed at 24 hours. At 0.5, 6, 12, 18, 24, 36, and 48 hours, atRA-d5 (100 nM) was added to each well (3 ml) and formation of 4-OH-atRA-d4 and 4-oxo-atRA-d3 after a 1-hour incubation was measured. All incubations were conducted in triplicate. An initial aliquot of the medium (1 ml) was removed 30 seconds after atRA-d5 addition as a control; after 1 hour at 37°C, a second aliquot of medium (1 ml) was removed from each well. 4-Oxo-13-cisRA (20 µl of a 2.5 µM stock solution in EtOH) was added to each sample as an internal standard, and samples were extracted using 3 ml ethyl acetate and analyzed using HPLC-MS/MS as described above. 4-Oxo-atRA-d3 was quantified using a reference material. Due to the lack of a standard, the relative change in formation of 4-OH-atRA-d4 was determined from the analyte to internal standard peak height ratio. Standard curves were constructed for atRA-d5 and 4-oxo-atRA-d3. The rate of 4-oxo-atRA-d3 formation from 4-OH-atRA-d4 was assumed to remain constant during treatment.
Characterization of 4-Oxo-atRA Formation from 4-OH-atRA in HepG2 cells.
To determine whether formation of 4-oxo-atRA is predominantly P450-mediated in HepG2 cells, the HepG2 cells were incubated with atRA or 4-OH-atRA (1 µM in the medium with 0.1% EtOH) for 24 hours in the presence and absence of ketoconazole (10 µM in the medium with 0.1% EtOH), a potent pan-P450 inhibitor (Thatcher et al., 2011). In addition, HepG2 cells were incubated in the presence of atRA and 4-OH-atRA with vehicle or alcohol dehydrogenase inhibitors 4-methylpyrazole (250 µM) and cimetidine (250 µM), the aldo-keto reductase inhibitor testosterone (25 µM), the retinol dehydrogenase inhibitor carbenoxolone (25 and 50 µM), and in the presence of atRA with talarozole (a selective CYP26 inhibitor; 1 µM). All treatments were performed in triplicate. An initial aliquot of the medium (0.5 ml) was taken before medium was added to each well to quantify the initial substrate concentrations per well. After 24 hours, a second aliquot of the medium (0.5 ml) was removed and extracted with ethyl acetate. Standard curves were constructed for atRA, 4-oxo-atRA, and 4-OH-atRA with an internal standard of 4-oxo-atRA-d3 (20 µl of a 2.5 µM stock solution). All samples were separated and analyzed for 4-OH-atRA and 4-oxo-atRA formation using the above-described HPLC-MS/MS method.
Characterization of 4-Oxo-RA and 18-OH-RA as CYP26A1 Substrates.
The metabolism of 4-oxo-atRA and 18-OH-atRA by CYP26A1 was evaluated by substrate depletion using a similar protocol as previously described for characterization of 4-OH-atRA depletion (Shimshoni et al., 2012; Topletz et al., 2012). The Bac-to-Bac Baculovirus Expression System (Invitrogen) with Sf9 insect cells was used to produce His-tagged CYP26A1 protein according to the manufacturer’s instructions using Sf-900 II SFM liquid media (Invitrogen) supplemented with 2.5% fetal bovine serum. During protein expression, ferric citrate (0.2 mM) and δ-aminolevulinic acid (0.3 mM) were added to the media 24 hours after infection to facilitate heme synthesis. The cells were harvested 72 hours after infection, washed once in phosphate-buffered saline with 1 mM phenylmethanesulphonylfluoride, pelleted, and stored at −80°C. Insect cell microsomes were prepared by standard ultracentrifugation at 120,000g and supplemented with P450 reductase prior to incubations. The P450 content of the final microsomal preparation was determined by the CO-difference spectrum.
For quantification of the substrates, standard curves for each substrate were prepared in 100 mM KPi buffer (pH 7.4) containing CYP26A1 (2 pmol/ml enzyme and 4 pmol/ml rat reductase) as previously described (Lutz et al., 2009; Thatcher et al., 2011). In brief, incubations containing substrate, 2 pmol/ml CYP26A1 in the endoplasmic reticulum membrane, and 4 pmol/ml purified rat reductase in 100 mM KPi buffer (pH 7.4) were preincubated for 5 minutes at 37°C before the addition of NADPH (final concentration of 1 mM) to initiate the reaction. Each sample initially contained a total volume of 2 ml, and 4-oxo-atRA and 18-OH-atRA were added at concentrations ranging from 5 to 150 nM. At 0.5, 1, 2, and 5 minutes, aliquots of 0.5 ml were collected and immediately quenched in a test tube containing 3 ml ice-cold ethyl acetate. For the final time point, ethyl acetate was added directly to the incubation vial. The internal standard 4-oxo-atRA-d3 (20 µl of a 2.5 µM stock solution in EtOH) was added, and samples were extracted as described above. All incubations were conducted in duplicate and 4-oxo-atRA and 18-OH-atRA were quantified using standard curves.
Retinoids from the in vitro incubations were analyzed using LC-MS/MS as described above for cell culture experiments except that analytes were detected using positive ion electrospray mass spectrometry, with the declustering potentials of 80 V, collision energies of 20 eV (18-OH-atRA), 35 eV (4-oxo-atRA-d3), and 37 eV (4-oxo-atRA), and collision exit potentials of 13 V (18-OH-RA and 4-oxo-atRA) and 2 (4-oxo-atRA-d3). The parent-fragment MS/MS transitions of m/z 317 → 253 Da (18-OH-atRA), 315 → 121 Da (4-oxo-atRA), and 300 → 226 Da (4-oxo-atRA-d3) were monitored.
Formation of 4-Oxo-atRA from 4-OH-atRA in Human Liver Microsomes.
Human liver microsomes (0.2 mg/ml) were incubated with 4-OH-atRA (500 nM) and NADPH, NADP+, or NAD+ (each at 2 mM) in 100 mM KPi buffer pH 7.4. In addition, 4-OH-atRA was incubated with human liver microsomes in the presence and absence of talarozole (a CYP26A1-specific inhibitor; 1 µM) and ketoconazole (a pan-P450 inhibitor; 10 µM) and with NADPH as a cofactor. After a 5-minute preincubation, the reactions were initiated with the addition of cofactor and incubated for 30 minutes. At 30 minutes, the reactions were quenched with equal volume of acetonitrile and centrifuged at 3000g for 15 minutes. The supernatants were collected and 4-oxo-atRA formation was analyzed by LC-MS/MS as described above. All incubations were normalized to a no cofactor control.
Data Analysis.
Mass spectrometry data were analyzed using Analyst software. Peak heights were used to determine the ratio of substrate to the internal standard. The areas under the medium and cell concentration versus time curves (AUCs) from 0 to 12 hours of atRA, (4R)-OH-atRA, (4S)-OH-atRA, 4-oxo-atRA, and 18-OH-atRA were calculated by noncompartmental analysis using Phoenix/WinNonLin 6.3 software (Pharsight, Mountain View, CA). The cell-to-medium ratio was calculated for each inducer and for their subsequent metabolites using their respective AUC0–12 h in HepG2 cells and the media. One-way analyses of variance coupled with Bonferroni multiple comparison tests were conducted using GraphPad Prism software (version 5) to determine significant differences in mRNA expression. Significant changes in 4-oxo-atRA formation from atRA or 4-OH-atRA in the presence of inhibitors compared with no inhibitor controls were compared using unpaired t test. P < 0.05 was considered significant. The Km values for 4-oxo-atRA and 18-OH-atRA were determined from the depletion data as previously described (Shimshoni et al., 2012).
Results
Induction of CYP26A1 and RARβ in HepG2 Cells and Human Hepatocytes, and RAR Activation by atRA and Its Metabolites.
The mRNA of CYP26A1 and RARβ was significantly (P < 0.05) increased after 48-hour treatment of HepG2 cells with atRA, 4-oxo-atRA, (4R)-OH-atRA, (4S)-OH-atRA, and 18-OH-atRA (1 μM), with atRA resulting in the greatest induction (Fig. 2). The induction of CYP26A1 and RARβ was retinoid concentration dependent (Fig. 2, B and C). The magnitude of CYP26A1 induction after 4-oxo-atRA treatment (2980-fold, 1 µM treatment) was approximately 80% of that after atRA treatment (3700-fold, 1 µM treatment), whereas the induction of CYP26A1 after 4-OH-atRA (both enantiomers) and 18-OH-atRA treatment was much less, 9–36% of that observed after atRA treatment (Fig. 2A). The magnitude of induction of CYP26A1 mRNA between (4R)-OH-atRA and (4S)-OH-atRA treatments was similar (P > 0.05). atRA and its metabolites also induced RARβ mRNA in a concentration-dependent manner, but the magnitude of RARβ induction was much less, approximately 3–18% of that observed with CYP26A1 (Fig. 2). There were no significant changes in RARα or RARγ mRNA upon treatment with atRA or any of the atRA metabolites (data not shown).
Similar to HepG2 cells, atRA, 4-oxo-atRA, and 4-OH-atRA significantly increased CYP26A1 and RARβ mRNA in human hepatocytes (Fig. 3) and the magnitude of CYP26A1 induction was approximately 5-fold greater than RARβ induction. In human hepatocytes, there was no significant induction of CRABP-I or CRABP-II by any of the three compounds. After the 2-hour treatment of human hepatocytes, atRA resulted in the greatest induction of CYP26A1 (16-fold, 1 µM treatment), whereas 4-OH-atRA was a weaker inducer (12-fold induction). The magnitude of CYP26A1 induction was substantially less in human hepatocytes after 2-hour treatment than in HepG2 cells after a 48-hour treatment.
In reporter cell lines, atRA was the most potent activator of all three RARs. 4-Oxo-atRA was 3- to 8-fold less potent than atRA (Fig. 4; Table 1). 4-OH-atRA was the least potent activator of all three RARs. It was 2- to 6-fold less potent than 4-oxo-atRA and 6- to 50-fold less potent than atRA in activating the three RARs (Table 1).
Retinoid Concentrations and Exposure in HepG2 Cells and Hepatocytes.
To determine whether the specific metabolites used in the HepG2 cell treatments were responsible for CYP26A1 and RARβ induction, retinoid concentrations and AUC0–12 h both in the medium and in cells were quantified after treatment with atRA or the metabolites (Fig. 5; Table 2). The initial concentration of each treatment was 1 μM; however, because of significant depletion of the inducers during incubations, the average concentration in cells during treatment was within physiologic concentrations of these compounds. In terms of absolute concentrations, atRA had the highest cell AUC0–12 h (3750 ± 350 nmol⋅h/ml), whereas (4S)-OH-atRA had the lowest AUC0–12 h (300 ± 10 nmol⋅h/ml) (Table 2). Although exposures to the 4-OH-atRA enantiomers were 90% lower than to atRA, the magnitude of CYP26A1 induction after treatment with 4-OH-atRA enantiomers was nearly 40% of that observed after atRA treatment, suggesting that 4-OH-atRA enantiomers or their metabolites are more potent activators of RAR than atRA. The cell AUC0–12 h of 4-oxo-atRA (980 ± 40 nmol⋅h/ml) was 60% lower than that of atRA, but treatment with 4-oxo-atRA resulted in a similar induction of CYP26A1 and RARβ as atRA, suggesting that 4-oxo-atRA is a more potent inducer of CYP26A1 and RARβ than atRA (Table 2). The cell-to-medium concentration ratio ranged from 70 for (4S)-OH-atRA to 360 for atRA, demonstrating differential partitioning of these retinoids into cells (Table 2).
Depletion of atRA was not observed during the first 12 hours of treatment (Figs. 5 and 6) and no formation of 4-OH-atRA or 4-oxo-atRA was detected in the medium during this time. In the cells, 4-OH-atRA and 4-oxo-atRA were detected at concentrations of approximately 3% of atRA after 12 hours of atRA treatment, suggesting minimal CYP26 activity at baseline in the HepG2 cells. Similar to atRA depletion, minimal depletion (up to 30%) of 4-oxo-atRA and 18-OH-atRA was observed in medium and cells during the first 12 hours of treatment (Figs. 5 and 6). Depletion of the 4-OH-atRA enantiomers was much more rapid than observed for atRA, 4-oxo-atRA, or 18-OH-atRA. During the first 12 hours of treatment 86% of (4S)-OH-atRA and 65% of (4R)-OH-atRA were depleted (Figs. 5 and 6). This depletion was accompanied by increased 4-oxo-atRA concentrations in the cells and medium, and the concentrations of 4-oxo-atRA in the cells were similar to those of 4-OH-atRA after treatments with the 4-OH-atRA enantiomers (Fig. 5).
After the first 24 hours of treatment, increased depletion of atRA (61%) was detected (Fig. 6) and 4-OH-atRA, 4-oxo-atRA, and 18-OH-atRA were detected as metabolites of atRA in both the cells and the medium. The depletion of 18-OH-atRA and 4-oxo-atRA was increased after 24 and 48 hours of treatment; 62% of 18-OH-atRA and 29% of 4-oxo-atRA were depleted at 24 hours and over 94% of both compounds were depleted at 48 hours (Fig. 6). (4R)-OH-atRA depletion was 89% and (4S)-OH-atRA depletion was 87% after 24 hours of treatment (Fig. 6).
In human hepatocytes, depletion of atRA, 4-OH-atRA, and 4-oxo-atRA, and formation of metabolites was observed already at 2 hours of treatment (Table 3). The medium exposure (AUC0–2 h) for 4-oxo-atRA was approximately 50% lower than that of atRA at all treatment concentrations, whereas the exposure to 4-OH-atRA was similar to that of atRA.
Time Course of CYP26A1 and RARβ Induction in HepG2 Cells.
To determine whether the time course of depletion for atRA, 4-oxo-atRA, and 18-OH-atRA could be explained by induction of CYP26A1 activity, the time course of CYP26A1 activity and CYP26A1 and RARβ mRNA was quantified. The time course of CYP26A1 mRNA induction in HepG2 cells is shown in Fig. 7 together with the time course of RARβ and CRABP-II induction. CYP26A1 activity was measured by quantifying the formation of 4-oxo-atRA-d3 and 4-OH-atRA-d4 from atRA-d5 at designated time points over a 48-hour treatment with atRA (1 µM). Formation of 4-OH-atRA-d4 was slow but detectable during the first 12 hours after initial treatment with atRA. It then increased approximately 7-fold (P < 0.05) at 24 hours and 33-fold (P < 0.05) at 48 hours after the initial treatment with atRA (Fig. 7). Formation of 4-oxo-atRA-d3 increased similarly as 4-OH-atRA-d4, approximately 7-fold (P < 0.05) at 24 hours and 22-fold (P < 0.05) at 48 hours after the treatment with atRA (Fig. 7C). The ratio of 4-OH-atRA-d4 to 4-oxo-atRA-d3 did not change with time. The time course of CYP26A1 activity was in agreement with atRA and 18-OH-atRA depletion but not with 4-OH-atRA depletion.
Formation of 4-Oxo-atRA from 4-OH-atRA in HepG2 Cells, Human Hepatocytes, and Human Liver Microsomes.
The major metabolite formed from both 4-OH-atRA enantiomers was 4-oxo-atRA and the metabolism of 4-OH-atRA enantiomers was stereoselective. The cell and medium AUCs for (4S)-OH-atRA were lower than those for (4R)-OH-atRA, suggesting a greater clearance of (4S)-OH-atRA in HepG2 cells. The AUC0–12h of 4-oxo-atRA as a metabolite of (4S)-OH-atRA was 2.1-fold higher than (4S)-OH-atRA cell AUC0–12h (Table 2, metabolite-to-parent ratio 2.1), whereas the AUC0–12h of 4-oxo-atRA was 40% lower than (4R)-OH-atRA in cells treated with (4R)-OH-RA (Table 2, metabolite-to-parent ratio 0.6). Consistent with the HepG2 cell metabolite-to-parent ratios, 4-oxo-atRA AUC0–12h was 25% lower than (4R)-OH-atRA AUC0–12h in the medium, whereas 4-oxo-atRA and (4S)-OH-atRA had equal AUCs. On the basis of these data, after (4S)-OH-atRA treatment, 4-oxo-atRA is the predominant retinoid in the cells, and the formation clearance of 4-oxo-atRA from (4S)-OH-atRA is higher than the formation clearance of 4-oxo-atRA from (4R)-OH-atRA. Interestingly, 4-OH-atRA was also detected as a reductive metabolite in HepG2 cells treated with 4-oxo-atRA and had an AUC0–12h that was 40% of that of 4-oxo-atRA in cells (Fig. 4; Table 2). No degradation of 4-oxo-atRA, (4R)-OH-atRA, or (4S)-OH-atRA was observed in the medium in the absence of cells (data not shown), indicating that the reversible oxidation/reduction seen in HepG2 cells is cell mediated.
In human hepatocytes treated with atRA for 2 hours, only 4-oxo-atRA was detected as a metabolite; in 4-OH-atRA–treated hepatocytes, significant formation of 4-oxo-atRA was observed at 2 hours of treatment. 4-Oxo-atRA concentrations in the media were 5–10% of those of 4-OH-atRA after 4-OH-atRA treatment (Table 3). Formation of 4-OH-atRA was also observed in the 4-oxo-atRA–treated cells (Table 3).
To determine whether formation of 4-oxo-atRA from 4-OH-atRA enantiomers is P450 mediated, HepG2 cells were first coincubated with ketoconazole and atRA or racemic 4-OH-atRA. Because formation of 4-OH-RA from atRA is predominantly CYP26A1 mediated, inhibition of 4-OH-atRA formation from atRA by ketoconazole was used as a positive control for CYP26A1 inhibition. In cells treated with atRA, ketoconazole decreased 4-OH-atRA formation by 84% (P < 0.05) and subsequent 4-oxo-atRA formation by 80% (P < 0.05) compared with the control cells (Table 4). Yet ketoconazole had no effect on 4-oxo-atRA formation in cells treated with 4-OH-atRA. The depletion of 4-OH-atRA was decreased by 25% (P < 0.05) by ketoconazole in agreement with a fraction of 4-OH-atRA cleared by CYP26A1 to products other than 4-oxo-atRA. When HepG2 cells were cotreated with atRA and talarozole (a CYP26-specific inhibitor), 4-OH-RA and 4-oxo-RA formation was significantly decreased, confirming that 4-OH-atRA formation in these cells is predominantly CYP26A1 mediated (Table 4). None of the other inhibitors tested decreased 4-oxo-atRA formation from 4-OH-atRA or atRA (Table 4).
To further evaluate the enzymes responsible for 4-oxo-atRA formation from 4-OH-atRA in the human liver, human liver microsomes were incubated with 4-OH-atRA in the presence of three different cofactors: NADPH, NADP+, and NAD+. All three cofactors supported 4-oxo-atRA formation (Fig. 8), but formation of 4-oxo-atRA in the presence of NAD+ was up to 4-fold higher than in the presence of NADPH or NADP+. Talarozole (a preferential CYP26A1 inhibitor) did not inhibit the NADPH-mediated formation of 4-oxo-atRA from 4-OH-atRA, whereas ketoconazole (a pan-P450 inhibitor) decreased the NADPH-mediated formation of 4-oxo-atRA by 50%.
Metabolism of 4-Oxo-atRA and 18-OH-atRA by CYP26A1.
The depletion of 4-oxo-atRA and 18-OH-atRA in HepG2 cells was observed after increased CYP26A1 activity, suggesting that both 18-OH-atRA and 4-oxo-atRA were cleared by CYP26A1. To determine the role of CYP26A1 in clearing 18-OH-atRA and 4-oxo-atRA, the depletion kinetics of both compounds was determined using recombinant CYP26A1 (Fig. 9). Both 18-OH-atRA and 4-oxo-atRA were efficiently depleted by CYP26A1. The Km values for 4-oxo-atRA and 18-OH-atRA depletion by CYP26A1 were 63.0 and 38.5 nM, respectively. Intrinsic clearance (CLint) by CYP26A1 was 2.5-fold higher for 18-OH-atRA (230 ± 43 µl/min per pmol P450) than for 4-oxo-atRA (90 ± 9.0 µl/min per pmol P450).
Discussion
This study shows that metabolites of atRA induce RARβ and CYP26A1 mRNA but only 4-oxo-atRA is an equipotent or more potent inducer than atRA. The induction of CYP26A1 mRNA observed in the HepG2 cells after atRA treatment is consistent with previous studies of CYP26A1 induction by atRA (Tay et al., 2010; Zhang et al., 2010). Similarly, the lower magnitude of RARβ induction compared with CYP26A1 is in agreement with previous results (Chambon, 1996; Tay et al., 2010). The fold induction of CYP26A1 was higher in HepG2 cells than in human hepatocytes, but overall the results in human hepatocytes supported the findings in HepG2 cells. The lower fold induction in hepatocytes may be due to higher baseline expression of CYP26A1 in hepatocytes compared with HepG2 cells or the much shorter induction time (2 hours) in hepatocytes than in HepG2 cells (48 hours). As shown in Fig. 6, the mRNA induction peaks at 48 hours in HepG2 cells. However, the short incubation time was chosen for hepatocytes to minimize metabolism and depletion of the inducers.
Induction of CYP26A1 and RARβ mRNA in HepG2 cells was previously shown to be RARα mediated (Tay et al., 2010), and the potency of CYP26A1 induction by the metabolites of atRA is expected to follow the binding affinity of the metabolites to RARα. Based on previous studies in transfected COS-7 cells, which are expected to have minimal CYP26A1 activity, 4-oxo-atRA is the most potent activator of RARα (EC50 = 33 nM), with atRA and 18-OH-RA being 5-fold less potent (EC50 = 169 and 162 nM, respectively) (Idres et al., 2002). However, in the current study in the reporter assays, atRA was about 3-fold more potent RARα agonist and 8-fold more potent RARβ agonist than was 4-oxo-atRA. Yet, in human hepatocytes atRA and 4-oxo-atRA had similar potency as CYP26 inducers. In HepG2 cells 18-OH-atRA was significantly less potent than atRA or 4-oxo-atRA in inducing CYP26A1 and RARβ, while 4-oxo-atRA and atRA were equipotent. These differences between studies and cell lines could be due to differential partitioning of the compounds into cells or expression of CRABPs. CRABPs may affect RAR activation and bind atRA with higher affinity than the metabolites. However, no CRABP-II induction was observed in HepG2 cells and CRABP-I was not expressed in HepG2 cells, suggesting that changes in binding protein expression do not contribute to observed induction.
In transfected COS-7 cells, 4-OH-atRA was the least potent activator of RARα (EC50 = 791 nM) (Idres et al., 2002). Similarly, in our studies, 4-OH-atRA was the least potent RAR agonist for all three RAR isoforms. However, in our studies in HepG2 cells, the CYP26A1 induction after 4-OH-atRA treatment was approximately one-third of that observed with atRA; in human hepatocytes, the induction of CYP26A1 by 4-OH-atRA was about 30% less than that observed after 1 μM atRA treatment. This difference between the reporter cell systems and HepG2 cells or hepatocytes is likely due to differences in formation of 4-oxo-atRA, because all of the data presented here support the interpretation that induction of RAR target genes after 4-OH-atRA treatments is largely attributable to the formation of 4-oxo-atRA.
Previous studies have shown that atRA, 4-OH-atRA, 18-OH-atRA, and 4-oxo-atRA are substrates of CYP26A1, and CYP26A1 forms a variety of diols and oxo-alcohols from these metabolites (Lutz et al., 2009; Shimshoni et al., 2012; Topletz et al., 2012). Although synthetic standards are not available for these sequential metabolites, the depletion clearance of the metabolites can be used to evaluate the role of CYP26A1 in their clearance. Using recombinant CYP26A1, atRA and (4S)-OH-atRA were found to have the highest CLint (1.2–1.4 ml/min per pmol) and 4-oxo-atRA the lowest CLint (0.09 ml/min per pmol) by CYP26A1. Interestingly, in HepG2 cells, 4-OH-atRA had more than 2-fold higher clearance than atRA, and the clearance of atRA was of similar magnitude as 4-oxo-atRA. The high clearance of 4-OH-atRA and 4-oxo-atRA compared with atRA in HepG2 cells suggests that multiple enzymes are involved in their elimination, and that the induction state of CYP26A1 affects the relative importance of CYP26A1 in retinoid clearance. It is well established that CYP26A1 is the main enzyme that clears atRA, and ketoconazole and talarozole effectively inhibited the metabolism of atRA in HepG2 cells, confirming the role of CYP26A1. Incubations with labeled atRA showed that there is minimal baseline CYP26A1 activity in HepG2 cells, a finding in agreement with the induction time course of CYP26A1 mRNA. However, on the basis of the data presented, there are additional enzymes already at baseline in the cells that clear 4-oxo-atRA and 4-OH-atRA. It is possible that glucuronidation of 4-OH-atRA (and the other retinoids via acyl glucuronides) contributes to 4-OH-atRA clearance in HepG2 cells and in hepatocytes, because UGT2B7 has been shown to glucuronidate 4-OH-atRA (Samokyszyn et al., 2000) and glucuronides are common in vivo metabolites of atRA. In addition, other additional enzymatic processes in the clearance of 4-OH-atRA and 4-oxo-atRA are supported by the observation of the reduction of 4-oxo-atRA back to 4-OH-atRA in the treated HepG2 cells and human hepatocytes, a reaction that is not likely to be P450 mediated. However, CYP26A1 appears to contribute to the clearance of 4-oxo-atRA and 4-OH-atRA because the clearance of these compounds was significantly greater after 48 hours of atRA treatment than during the first 24 hours.
Despite the fact that all metabolites are substrates of CYP26A1 and their clearances increase with increasing CYP26A1 activity, formation of 4-oxo-atRA from 4-OH-atRA appears not to be CYP26A1 mediated in HepG2 cells or in human liver. In HepG2 cells, there was no change in 4-oxo-atRA formation from 4-OH-atRA in the presence of the P450-inhibitor ketoconazole. Surprisingly, the formation of 4-oxo-atRA from 4-OH-atRA was also not decreased in the presence of inhibitors of several alcohol dehydrogenases, aldoketoreductases, or membrane-bound retinol dehydrogenases in HepG2 cells, suggesting that the enzyme responsible for 4-oxo-atRA formation is yet to be identified. In human liver microsomes, the formation of 4-oxo-atRA was supported by NAD+ and to a lesser extent NADP+ and NADPH, suggesting that a microsomal alcohol dehydrogenase may be responsible for the majority of 4-oxo-atRA formation in human liver. These findings are in agreement with a previous report in which 4-oxo-atRA formation was found to be NAD+ and NADP+ mediated in hamster liver microsomes (Roberts et al., 1980). However, in contrast with the hamster liver microsomes, there are also P450 enzymes in the human liver that can carry out this reaction, as shown by the fact that NADPH could support the 4-oxo-atRA formation and this formation was inhibited partially by ketoconazole. Yet no inhibition of 4-oxo-atRA formation was observed with talarozole (a CYP26A1 inhibitor), showing that the formation of 4-oxo-atRA is not mediated by CYP26A1.
The formation of 4-oxo-atRA by a novel enzyme is noteworthy because 4-oxo-atRA is the only nonglucuronidated atRA metabolite detected in human plasma (Muindi et al., 1992a, 2008; Arnold et al., 2012). 4-Oxo-atRA accounts for 10–20% of the atRA dose in vivo, both in plasma and as 4-oxo-RA-glucuronide in the urine (Muindi et al., 1992a, 2008; Arnold et al., 2012), making it a significant metabolite. The abundance of 4-oxo-atRA together with its proven biologic activity in animal models suggests that 4-oxo-atRA formation may contribute to some of the observed retinoid effects in vivo. The conclusive determination of the biologic importance of 4-oxo-atRA in vitamin A activity will require identification of the specific enzyme(s) that form this metabolite from 4-OH-atRA.
The findings presented showing that atRA and its metabolites induce CYP26A1 expression, and hence their own clearance, have implications in the broader context of understanding atRA resistance during therapy with atRA. The autoinduction of atRA clearance limits efficacy of atRA in various cancer treatments. The data presented here suggest that induction of CYP26A1 that results in increased metabolism of atRA and 4-oxo-atRA is a major contributor to atRA resistance. However, it has also been suggested that pregnane X receptor activation by comedications induces atRA clearance in the liver, likely via CYP3A4 induction (Wang et al., 2008). Further in vivo studies involving administration of the metabolites of atRA are needed to completely characterize the mechanisms involved in atRA resistance and the role that the metabolites may play.
In conclusion, this study shows that CYP26A1 functions primarily as an enzyme that metabolizes atRA, 4-OH-atRA, 18-OH-atRA, and 4-oxo-atRA into biologically inactive retinoids and does not contribute to the formation of metabolites with distinct retinoid activity. The results demonstrate that 4-oxo-atRA, (4S)-OH-atRA, (4R)-OH-atRA, and 18-OH-atRA induce CYP26A1 and therefore also their own formation. This autoinduction may have broader clinical significance because retinoid resistance is commonly believed to be a result of induction of CYP26A1 in target tissues and cells leading to resistance to therapeutic retinoids. The formation of the most potent inducer of RAR target genes (4-oxo-atRA from 4-OH-atRA) likely depends on an unidentified microsomal alcohol dehydrogenase, suggesting that 4-oxo-atRA may have a biologic role independent of atRA. Further evaluation of the in vivo effects of 4-oxo-atRA and 4-OH-atRA is warranted to determine the full biologic significance of these metabolites and the enzymes forming them.
Acknowledgments
The authors thank Faith Stevison for skillful assistance with LC-MS/MS.
Authorship Contributions
Participated in research design: Topletz, Tripathy, Foti, Nelson, Isoherranen.
Conducted experiments: Topletz, Tripathy, Foti.
Contributed new reagents or analytic tools: Topletz, Shimshoni, Nelson.
Performed data analysis: Topletz, Tripathy, Foti, Isoherranen.
Wrote or contributed to the writing of the manuscript: Topletz, Tripathy, Foti, Nelson, Isoherranen.
Footnotes
- Received November 9, 2014.
- Accepted December 8, 2014.
This research was supported in part by the National Institutes of Health National Institute of General Medical Sciences [Grants R01-GM081569 and R01-GM111772]. Research reported in this publication was supported in part by the National Institutes of Health National Center for Advancing Translational Sciences through the Clinical and Translational Science Awards Program [Grant TL1-TR000422]. The content is solely the responsibility of the authors and does not necessarily represent the official views of the National Institutes of Health.
Abbreviations
- atRA
- all-trans-retinoic acid
- AUC
- area under the concentration curve
- CRABP
- cellular retinoic acid binding protein
- HPLC
- high-performance liquid chromatography
- KPi
- potassium phosphate
- LC
- liquid chromatography
- MS/MS
- tandem mass spectrometry
- P450
- cytochrome P450
- RA
- retinoic acid
- RAR
- retinoic acid receptor
- Copyright © 2015 by The American Society for Pharmacology and Experimental Therapeutics