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Molecular Pharmacology

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Research ArticleArticle

The bioactive protein-ligand conformation of GluN2C-selective positive allosteric modulators bound to the NMDA receptor

Thomas Maxwell Kaiser, Steven A Kell, Hirofumi Kusumoto, Gil Shaulsky, Subhrajit Bhattacharya, Matthew P Epplin, Katie L Strong, Eric J Miller, Bryan D Cox, David S Menaldino, Dennis C Liotta, Stephen F Traynelis and Pieter Buys Burger
Molecular Pharmacology December 14, 2017, mol.117.110940; DOI: https://doi.org/10.1124/mol.117.110940
Thomas Maxwell Kaiser
Emory University
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Steven A Kell
Emory University
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Hirofumi Kusumoto
Emory University
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Gil Shaulsky
Emory University
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Subhrajit Bhattacharya
Emory University
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Matthew P Epplin
Emory University
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Katie L Strong
Emory University
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Eric J Miller
Emory University
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Bryan D Cox
Emory University
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David S Menaldino
Emory University
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Dennis C Liotta
Emory University
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Stephen F Traynelis
Emory University
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Pieter Buys Burger
Emory University
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Additional Files

  • Data Supplement

    • Supplemental Data -

      Supplemental Figure 1 - 1D proton NMR spectrum of PYD-106
      Supplemental Figure 2 - 2D NOESY NMR spectrum of PYD-106 (400ms)
      Supplemental Figure 3 - NMR experimental observations
      Supplemental Figure 4 - The alignment used for building in the linker region between ATD and ABD
      Supplemental Material 5 - Attempt as separation of PYD enantiomers
      Supplemental Figure 6 - The ROC curves and Enrichment plots of the S-enantiomer of 79 compounds representative of the PYD series docked to 9 homology models
      Supplemental Figure 7 - The ROC curves and Enrichment plots of the R-enantiomer of 79 compounds representative of the PYD series docked to 10 homology models
      Supplemental Figure 8 - Enrichment plot for PYD-series docked against the selected GluN2C homology model
      Supplemental Figure 9 - Molecular overlay of the GluN1/GluN2C diheteromeric homology model and a diheteromeric GluN1/GluN2B Cryo-EM structure (PDBID: 5IOU)
      Supplemental Table 1 - Shared sequence identity and similarity between NMDA subunits of the PYD binding pocket

    • PDB - Ligand-receptor complex -

      A PDB structure of the ligand receptor complex of GluN2C and PYD-106

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Molecular Pharmacology: 103 (4)
Molecular Pharmacology
Vol. 103, Issue 4
1 Apr 2023
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Research ArticleArticle

The bioactive protein-ligand conformation of GluN2C-selective positive allosteric modulators bound to the NMDA receptor

Thomas Maxwell Kaiser, Steven A Kell, Hirofumi Kusumoto, Gil Shaulsky, Subhrajit Bhattacharya, Matthew P Epplin, Katie L Strong, Eric J Miller, Bryan D Cox, David S Menaldino, Dennis C Liotta, Stephen F Traynelis and Pieter Buys Burger
Molecular Pharmacology December 14, 2017, mol.117.110940; DOI: https://doi.org/10.1124/mol.117.110940

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Research ArticleArticle

The bioactive protein-ligand conformation of GluN2C-selective positive allosteric modulators bound to the NMDA receptor

Thomas Maxwell Kaiser, Steven A Kell, Hirofumi Kusumoto, Gil Shaulsky, Subhrajit Bhattacharya, Matthew P Epplin, Katie L Strong, Eric J Miller, Bryan D Cox, David S Menaldino, Dennis C Liotta, Stephen F Traynelis and Pieter Buys Burger
Molecular Pharmacology December 14, 2017, mol.117.110940; DOI: https://doi.org/10.1124/mol.117.110940
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