Description of the data set used to build the HMMs used for mining and classification into the 15 main families of GPCRs in the genomes investigated
The source of the dataset is indicated in parentheses.
| Model Name | Number of GPCRs | Description |
|---|---|---|
| ADHSEC | 46 | 13 human secretin-like GPCRs (Fredriksson et al., 2003c); 33 adhesion-like GPCRs (Fredriksson et al., 2002, 2003a,b) |
| CAMP | 4 | cAMP binding GPCRs from Dictyostelium (http://www.gpcr.org/7tm/) |
| DMODOR | 39 | D. melanogaster odorant receptors (http://www.gpcr.org/7tm/) |
| FZD | 11 | Human Frizzled 1-10 and smoothened (Fredriksson et al., 2003c) |
| GUST | 72 | Gustatory receptors from A. gambiae (Hill et al., 2002) |
| GLR | 18 | 8 metabotropic glutamate receptors, 3 taste receptors type 1, 2 GABA receptors, calcium-sensing receptor, 4 orphan GPCRs (Fredriksson et al., 2003c) |
| MLO | 16 | Plant GPCRs of the MLO type (Devoto et al., 2003) |
| NCHM | 34 | Nematode chemokine receptors (http://www.gpcr.org/7tm/) |
| OA1 | 2 | Ocular albinism genes from mouse and human (Fredriksson et al., 2003c) |
| RHOD | 260 | Human Rhodopsin receptors (Fredriksson et al., 2003c) |
| STE2 | 4 | Yeast pheromone receptors of the STE2 type (http://www.gpcr.org/7tm/) |
| STE3 | 4 | Yeast pheromone receptors of the STE2 type (http://www.gpcr.org/7tm/) |
| TAS2 | 13 | Human taste receptors type 2 (Fredriksson et al., 2003c) |
| VR | 42 | Vomeronasal receptors from mouse and rat (http://www.gpcr.org/7tm/) |