Elsevier

Cell Calcium

Volume 52, Issue 1, July 2012, Pages 44-51
Cell Calcium

Mitochondrial Ca2+ signals in autophagy

https://doi.org/10.1016/j.ceca.2012.03.001Get rights and content

Abstract

Macroautophagy (autophagy) is a lysosomal degradation pathway that is conserved from yeast to humans that plays an important role in recycling cellular constituents in all cells. A number of protein complexes and signaling pathways impinge on the regulation of autophagy, with the mammalian target of rapamycin (mTOR) as the central player in the canonical pathway. Cytoplasmic Ca2+ signaling also regulates autophagy, with both activating and inhibitory effects, mediated by the canonical as well as non-canonical pathways. Here we review this regulation, with a focus on the role of an mTOR-independent pathway that involves the inositol trisphosphate receptor (InsP3R) Ca2+ release channel and Ca2+ signaling to mitochondria. Constitutive InsP3R Ca2+ transfer to mitochondria is required for autophagy suppression in cells in nutrient-replete media. In its absence, cells become metabolically compromised due to insufficient production of reducing equivalents to support oxidative phosphorylation. Absence of this Ca2+ transfer to mitochondria results in activation of AMPK, which activates mTOR-independent pro-survival autophagy. Constitutive InsP3R Ca2+ release to mitochondria is an essential cellular process that is required for efficient mitochondrial respiration, maintenance of normal cell bioenergetics and suppression of autophagy.

Introduction

Autophagy, a lysosomal degradation pathway that is conserved from yeast to humans, plays an important role in degrading and recycling cellular constituents, including damaged organelles. It operates as a bulk degradation system in all cells as a complementary system to the ubiquitin–proteasome degradation pathway [1]. At least three types of autophagy have been described according to their lysosomal delivery mechanisms: microautophagy, chaperone-mediated autophagy and macroautophagy [2]. Among these, macroautophagy is the only one that has been observed to date to be regulated by Ca2+ [3] and will therefore be the focus of this review. Macroautophagy involves the formation of a double membrane cistern, possibly derived from several sources including endoplasmic reticulum [4] and mitochondria [5], that enlarges and fuses with itself, engulfing cytoplasmic constituents within an autophagosome in a process involving an evolutionary set of over 20 conserved proteins (known as Atg proteins) essential for the execution of autophagy [1], [6]. Autophagosomes fuse with late endosomes and lysosomes, promoting the delivery of organelles, aggregated proteins and cytoplasm to the luminal acidic degradative milieu that enables their breakdown into constituent molecular building blocks that can be recycled by the cell [1]. Macroautophagy is a bulk cytoplasmic degradation pathway, but under some situations it appears to operate in an organelle-selective way, for example towards mitochondria, referred to as mitophagy, and the endoplasmic reticulum, referred to as reticulophagy [7]. Macroautophagy, hereafter referred to as autophagy, plays different cellular roles depending on physiological context. In unstressed cells, low rates of autophagy perform a housekeeping function, termed quality control autophagy, that is essential for maintenance of normal cellular homeostasis [8]. Autophagy also has important roles in cellular responses to certain invading pathogens including bacteria and viruses [2], and it also functions in developmental cell death, tumor suppression, and aging, and it has been implicated in neurodegeneration, cardiovascular disease and cancer [1], [9]. Under conditions of stress, most famously starvation, autophagy is strongly activated as a pro-survival mechanism by promoting the recycling of fatty acids and amino acids to meet cellular metabolic demands, either through synthesis of new macromolecules or by their oxidation in mitochondria to maintain cellular ATP and viability until nutrient supplies are restored [10]. Autophagy has also been implicated in cell death, referred to as programmed cell death type II [11]. However, because there is little direct evidence for autophagy as the primary driver of cell death under (patho)physiological conditions, it has been referred to as cell death “with autophagic features” [12].

Section snippets

mTOR dependent autophagy and cytoplasmic calcium

A number of protein complexes and signaling pathways are involved in the initiation of autophagy, the maturation of autophagosomes, and their delivery to and fusion with lysosomes [1], [13]. The central player in the regulation of autophagy, representing the canonical pathway of autophagy activation, is the mammalian target of rapamycin (mTOR), specifically the complex 1 (mTORC1) [14], [15]. mTORC1 is a serine-threonine kinase that plays important roles in regulating cell growth, cell cycle

mTOR independent autophagy and InsP3R Ca2+ signaling

Ca2+ signaling has also been linked to non-canonical, mTOR-independent autophagy. In a seminal study, Sarkar et al. observed that lithium (Li+) stimulates autophagy in an mTOR-independent manner by inhibiting inositol monophosphatase (IMPase), the enzyme responsible for maintaining cellular levels of free inositol required for phosphatidylinositol signaling [41]. Li+ activation of autophagy could be reversed by manipulations that raised cytoplasmic InsP3 levels, implicating phosphatidylinositol

Calcium signals and mitochondria

AMPK is a highly sensitive indicator of cellular energy status, whose activity increases under conditions of metabolic stress that elevate the cytoplasmic AMP:ATP ratio [20]. Treatment of hepatocytes with XeB increased AMP levels and the AMP:ATP ratio [37]. The presence of elevated [AMP] and the requirement for AMPK activation to induce pro-survival autophagy in response to loss of InsP3R Ca2+ signaling suggested that cells lacking this pathway have compromised bioenergetics. In agreement,

Essential regulation of cell bioenergetics by constitutive InsP3R Ca2+ transfer to mitochondria

Elevated [AMP] and the requirement for AMPK activation to induce pro-survival autophagy in response to loss of InsP3R Ca2+ signaling suggests that cells lacking this pathway have compromised bioenergetics. In a simple model, constitutive low-level InsP3R-mediated Ca2+ transfer to mitochondria promotes oxidative phosphorylation, and cells lacking this pathway have diminished bioenergetics that are sensed by AMPK that activates autophagy. In agreement, incubating cells with methyl-pyruvate that

Summary

In summary, an essential cellular process that is required for efficient mitochondrial respiration and maintenance of normal cell bioenergetics involves constitutive Ca2+ transfer from the ER to mitochondria mediated by the InsP3R (Fig. 2). In the absence of this ongoing uptake of Ca2+ by mitochondria, oxidative phosphorylation is reduced, lowering cellular levels of ATP. This bioenergetic deficit is sensed by AMPK, which in turn activates autophagy as a survival mechanism. Activation of

Acknowledgements

The authors acknowledge financial support from the National Institutes of Health (GM/DK56328 to JKF) and FONDECYT (1120443 to CC). CC was supported by an award from the American Heart Association.

References (89)

  • L.A. Witters et al.

    Chutes and Ladders: the search for protein kinases that act on AMPK

    Trends Biochem. Sci.

    (2006)
  • M. Hoyer-Hansen et al.

    Control of macroautophagy by calcium, calmodulin-dependent kinase kinase-beta, and Bcl-2

    Mol. Cell

    (2007)
  • Y. Wang et al.

    Host cell autophagy is induced by Toxoplasma gondii and contributes to parasite growth

    J. Biol. Chem.

    (2009)
  • A. Grotemeier et al.

    AMPK-independent induction of autophagy by cytosolic Ca2+ increase

    Cell Signal.

    (2010)
  • C. Cardenas et al.

    Essential regulation of cell bioenergetics by constitutive InsP3 receptor Ca2+ transfer to mitochondria

    Cell

    (2010)
  • M.T. Khan et al.

    Role of inositol trisphosphate receptors in autophagy in DT40 cells

    J. Biol. Chem.

    (2010)
  • P. Gulati et al.

    Amino acids activate mTOR complex 1 via Ca2+/CaM signaling to hVps34

    Cell Metab.

    (2008)
  • S.F. Funderburk et al.

    The Beclin 1-VPS34 complex – at the crossroads of autophagy and beyond

    Trends Cell Biol.

    (2010)
  • F.M. Lasorsa et al.

    Recombinant expression of the Ca2+-sensitive aspartate/glutamate carrier increases mitochondrial ATP production in agonist-stimulated Chinese hamster ovary cells

    J. Biol. Chem.

    (2003)
  • A. Spat et al.

    High- and low-calcium-dependent mechanisms of mitochondrial calcium signalling

    Cell Calcium

    (2008)
  • G. Hajnoczky et al.

    Decoding of cytosolic calcium oscillations in the mitochondria

    Cell

    (1995)
  • J.J. Lemasters et al.

    Mitochondrial calcium and the permeability transition in cell death

    Biochim. Biophys. Acta

    (2009)
  • R.S. Balaban

    The role of Ca2+ signaling in the coordination of mitochondrial ATP production with cardiac work

    Biochim. Biophys. Acta

    (2009)
  • B. Cheng et al.

    Modulation of calcium current, intracellular calcium levels and cell survival by glucose deprivation and growth factors in hippocampal neurons

    Brain Res.

    (1993)
  • M.B. Ferrari et al.

    Calcium signaling in the developing Xenopus myotome

    Dev. Biol.

    (1999)
  • I.F. Smith et al.

    Localization of puff sites adjacent to the plasma membrane: functional and spatial characterization of Ca2+ signaling in SH-SY5Y cells utilizing membrane-permeant caged IP3

    Cell Calcium

    (2009)
  • E.F. Eckenrode et al.

    Apoptosis protection by Mcl-1 and Bcl-2 modulation of inositol 1,4,5-trisphosphate receptor-dependent Ca2+ signaling

    J. Biol. Chem.

    (2010)
  • S. Horman et al.

    Activation of AMP-activated protein kinase leads to the phosphorylation of elongation factor 2 and an inhibition of protein synthesis

    Curr. Biol.

    (2002)
  • A. Salminen et al.

    Regulation of the aging process by autophagy

    Trends Mol. Med.

    (2009)
  • B. Ravikumar et al.

    Regulation of mammalian autophagy in physiology and pathophysiology

    Physiol. Rev.

    (2010)
  • E. Wirawan et al.

    Autophagy: for better or for worse

    Cell Res.

    (2012)
  • E.L. Axe et al.

    Autophagosome formation from membrane compartments enriched in phosphatidylinositol 3-phosphate and dynamically connected to the endoplasmic reticulum

    J. Cell Biol.

    (2008)
  • N. Mizushima et al.

    Protein turnover via autophagy: implications for metabolism

    Annu. Rev. Nutr.

    (2007)
  • D.J. Klionsky et al.

    How shall I eat thee?

    Autophagy

    (2007)
  • J.Y. Lee et al.

    Quality control autophagy: a joint effort of ubiquitin, protein deacetylase and actin cytoskeleton

    Autophagy

    (2010)
  • G. Marino et al.

    Autophagy: molecular mechanisms, physiological functions and relevance in human pathology

    Cell Mol. Life Sci.

    (2004)
  • F. Scarlatti et al.

    Does autophagy have a license to kill mammalian cells?

    Cell Death Differ.

    (2009)
  • S. Shen et al.

    The end of autophagic cell death?

    Autophagy

    (2012)
  • Y.P. Yang et al.

    Molecular mechanism and regulation of autophagy

    Acta Pharmacol. Sin.

    (2005)
  • S. Alers et al.

    Role of AMPK-mTOR-Ulk1/2 in the regulation of autophagy: cross talk, shortcuts, and feedbacks

    Mol. Cell Biol.

    (2012)
  • D.G. Hardie

    AMP-activated/SNF1 protein kinases: conserved guardians of cellular energy

    Nat. Rev. Mol. Cell Biol.

    (2007)
  • Z. Wang et al.

    Antagonistic controls of autophagy and glycogen accumulation by Snf1p, the yeast homolog of AMP-activated protein kinase, and the cyclin-dependent kinase Pho85p

    Mol. Cell Biol.

    (2001)
  • Y. Matsui et al.

    Distinct roles of autophagy in the heart during ischemia and reperfusion: roles of AMP-activated protein kinase and Beclin 1 in mediating autophagy

    Circ. Res.

    (2007)
  • D.F. Egan et al.

    Phosphorylation of ULK1 (hATG1) by AMP-activated protein kinase connects energy sensing to mitophagy

    Science

    (2011)
  • Cited by (0)

    View full text