User profiles for Antrix Jain
Antrix JainBaylor College of Medicine Verified email at bcm.edu Cited by 2103 |
The spliceosome is a therapeutic vulnerability in MYC-driven cancer
…, K Scorsone, RJ Bernardi, SO Skinner, A Jain… - Nature, 2015 - nature.com
MYC (also known as c-MYC) overexpression or hyperactivation is one of the most common
drivers of human cancer. Despite intensive study, the MYC oncogene remains recalcitrant to …
drivers of human cancer. Despite intensive study, the MYC oncogene remains recalcitrant to …
[HTML][HTML] A proteomic landscape of diffuse-type gastric cancer
The diffuse-type gastric cancer (DGC) is a subtype of gastric cancer with the worst prognosis
and few treatment options. Here we present a dataset from 84 DGC patients, composed of a …
and few treatment options. Here we present a dataset from 84 DGC patients, composed of a …
[HTML][HTML] Acetylation disfavors tau phase separation
Neuropathological aggregates of the intrinsically disordered microtubule-associated protein
Tau are hallmarks of Alzheimer’s disease, with decades of research devoted to studying the …
Tau are hallmarks of Alzheimer’s disease, with decades of research devoted to studying the …
[PDF][PDF] Region-specific transcriptional control of astrocyte function oversees local circuit activities
Astrocytes play essential roles in brain function by supporting synaptic connectivity and
associated circuits. How these roles are regulated by transcription factors is unknown. Moreover, …
associated circuits. How these roles are regulated by transcription factors is unknown. Moreover, …
Casein kinase 2 is linked to stress granule dynamics through phosphorylation of the stress granule nucleating protein G3BP1
Stress granules (SGs) are large macromolecular aggregates that contain translation initiation
complexes and mRNAs. Stress granule formation coincides with translational repression, …
complexes and mRNAs. Stress granule formation coincides with translational repression, …
[HTML][HTML] Intermittent fasting from dawn to sunset for 30 consecutive days is associated with anticancer proteomic signature and upregulates key regulatory proteins of …
Murine studies showed that disruption of circadian clock rhythmicity could lead to cancer and
metabolic syndrome. Time-restricted feeding can reset the disrupted clock rhythm, protect …
metabolic syndrome. Time-restricted feeding can reset the disrupted clock rhythm, protect …
[HTML][HTML] CRISPR/Cas9 screen uncovers functional translation of cryptic lncRNA-encoded open reading frames in human cancer
Emerging evidence suggests that cryptic translation within long noncoding RNAs (lncRNAs)
may produce novel proteins with important developmental/physiological functions. However…
may produce novel proteins with important developmental/physiological functions. However…
[HTML][HTML] Intermittent fasting from dawn to sunset for four consecutive weeks induces anticancer serum proteome response and improves metabolic syndrome
Metabolic syndrome is characterized by central obesity, insulin resistance, elevated blood
pressure, and dyslipidemia. Metabolic syndrome is a significant risk factor for several common …
pressure, and dyslipidemia. Metabolic syndrome is a significant risk factor for several common …
DeepRescore: leveraging deep learning to improve peptide identification in immunopeptidomics
The identification of major histocompatibility complex (MHC)‐binding peptides in mass
spectrometry (MS)‐based immunopeptideomics relies largely on database search engines …
spectrometry (MS)‐based immunopeptideomics relies largely on database search engines …
[HTML][HTML] gpGrouper: a peptide grouping algorithm for gene-centric inference and quantitation of bottom-up proteomics data
In quantitative mass spectrometry, the method by which peptides are grouped into proteins
can have dramatic effects on downstream analyses. Here we describe gpGrouper, an …
can have dramatic effects on downstream analyses. Here we describe gpGrouper, an …